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CRABP1 cellular retinoic acid binding protein 1 [ Equus caballus (horse) ]

Gene ID: 100050413, updated on 17-Aug-2024

Summary

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Official Symbol
CRABP1provided by VGNC
Official Full Name
cellular retinoic acid binding protein 1provided by VGNC
Primary source
VGNC:VGNC:16846
See related
Ensembl:ENSECAG00000030224
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See CRABP1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 1 NC_009144.3 (117105496..117112242)

Chromosome 1 - NC_009144.3Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member A4 Neighboring gene SKI8 subunit of superkiller complex Neighboring gene uncharacterized LOC111775655 Neighboring gene iron responsive element binding protein 2 Neighboring gene hydroxylysine kinase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009144.3 Chromosome 1 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables retinoic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cellular retinoic acid-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009144.3 Reference EquCab3.0 Primary Assembly

    Range
    117105496..117112242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001488922.4 → XP_001488972.1  cellular retinoic acid-binding protein 1

    See identical proteins and their annotated locations for XP_001488972.1

    UniProtKB/TrEMBL
    A0A3Q2HZJ8, A0A9L0TEM4
    Related
    ENSECAP00000085587.1, ENSECAT00000126358.1
    Conserved Domains (1) summary
    cd19460
    Location:2 → 137
    CRABP1; cellular retinoic acid-binding protein 1
Nucleotide Protein
Heading Accession and Version

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