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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Equus caballus (horse) ]

Gene ID: 100050356, updated on 17-Aug-2024

Summary

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Official Symbol
MGAT5provided by VGNC
Official Full Name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferaseprovided by VGNC
Primary source
VGNC:VGNC:51469
See related
Ensembl:ENSECAG00000019492
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (18267885..18559089)

Chromosome 18 - NC_009161.3Genomic Context describing neighboring genes Neighboring gene NCK associated protein 5 Neighboring gene uncharacterized LOC102150991 Neighboring gene uncharacterized LOC111768886 Neighboring gene transmembrane protein 163 Neighboring gene uncharacterized LOC106781942 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009161.3 Chromosome 18 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009161.3 Reference EquCab3.0 Primary Assembly

    Range
    18267885..18559089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014732437.2 → XP_014587923.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A

    UniProtKB/TrEMBL
    A0A9L0T4B2, A0A9L0TMG6
    Related
    ENSECAP00000087806.1, ENSECAT00000128166.1
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:3 → 138
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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