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EXTL2 exostosin like glycosyltransferase 2 [ Equus caballus (horse) ]

Gene ID: 100050181, updated on 17-Aug-2024

Summary

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Official Symbol
EXTL2provided by VGNC
Official Full Name
exostosin like glycosyltransferase 2provided by VGNC
Primary source
VGNC:VGNC:17743
See related
Ensembl:ENSECAG00000016110
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See EXTL2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 5 NC_009148.3 (62086860..62106395)

Chromosome 5 - NC_009148.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102147722 Neighboring gene diphthamide biosynthesis 5 Neighboring gene solute carrier family 30 member 7 Neighboring gene vascular cell adhesion molecule 1 Neighboring gene uncharacterized LOC111773572

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009148.3 Chromosome 5 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009148.3 Reference EquCab3.0 Primary Assembly

    Range
    62086860..62106395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023641541.1 → XP_023497309.1  exostosin-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HTR4
    Conserved Domains (1) summary
    pfam09258
    Location:66 → 317
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_005610394.3 → XP_005610451.1  exostosin-like 2 isoform X1

    See identical proteins and their annotated locations for XP_005610451.1

    UniProtKB/TrEMBL
    A0A3Q2HTR4
    Related
    ENSECAP00000037593.2, ENSECAT00000057103.2
    Conserved Domains (1) summary
    pfam09258
    Location:66 → 317
    Glyco_transf_64; Glycosyl transferase family 64 domain

  3. XM_023641543.1 → XP_023497311.1  exostosin-like 2 isoform X2

    UniProtKB/TrEMBL
    A0A3Q2HTR4
    Conserved Domains (1) summary
    pfam09258
    Location:66 → 316
    Glyco_transf_64; Glycosyl transferase family 64 domain

  4. XM_023641542.1 → XP_023497310.1  exostosin-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HTR4
    Conserved Domains (1) summary
    pfam09258
    Location:66 → 317
    Glyco_transf_64; Glycosyl transferase family 64 domain

  5. XM_023641544.1 → XP_023497312.1  exostosin-like 2 isoform X3

    UniProtKB/TrEMBL
    A0A3Q2HTR4
    Conserved Domains (1) summary
    pfam09258
    Location:53 → 304
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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