U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHST8 carbohydrate sulfotransferase 8 [ Equus caballus (horse) ]

Gene ID: 100050006, updated on 17-Aug-2024

Summary

Go to the top of the page Help
Official Symbol
CHST8provided by VGNC
Official Full Name
carbohydrate sulfotransferase 8provided by VGNC
Primary source
VGNC:VGNC:16539
See related
Ensembl:ENSECAG00000008591
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHST8 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 10 NC_009153.3 (4833378..4946641)

Chromosome 10 - NC_009153.3Genomic Context describing neighboring genes Neighboring gene CCAAT enhancer binding protein gamma Neighboring gene peptidase D Neighboring gene potassium channel tetramerization domain containing 15 Neighboring gene uncharacterized LOC106782077

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_009153.3 Chromosome 10 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009153.3 Reference EquCab3.0 Primary Assembly

    Range
    4833378..4946641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001489047.4 → XP_001489097.1  carbohydrate sulfotransferase 8 isoform X2

    See identical proteins and their annotated locations for XP_001489097.1

    UniProtKB/TrEMBL
    F6W4B7
    Related
    ENSECAP00000006535.1, ENSECAT00000008692.4
    Conserved Domains (1) summary
    pfam03567
    Location:186 → 415
    Sulfotransfer_2; Sulfotransferase family

  2. XM_023649501.1 → XP_023505269.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2HWS1
    Related
    ENSECAP00000038889.1, ENSECAT00000062601.2
    Conserved Domains (1) summary
    pfam03567
    Location:221 → 450
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials