U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

hsbp1.L heat shock factor binding protein 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100049129, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
hsbp1.L
Official Full Name
heat shock factor binding protein 1 L homeolog
Primary source
Xenbase:XB-GENE-952443
Locus tag
XELAEV_18022656mg
See related
AllianceGenome:Xenbase:XB-GENE-952443
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
hsbp1; hsbp1a; hsbp1-a; hsbp1-b; NPC-A-13
Summary
Predicted to enable transcription corepressor activity. Predicted to act upstream of or within cellular heat acclimation. Predicted to be located in cytosol and nucleus. Orthologous to human HSBP1 (heat shock factor binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See hsbp1.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (56609988..56617124)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (51401219..51408456)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene potassium channel, voltage gated modifier subfamily G, member 4 L homeolog Neighboring gene solute carrier family 66 member 2, gene 2 L homeolog Neighboring gene uncharacterized LOC108713508 Neighboring gene uncharacterized LOC108714083

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within cellular heat acclimation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
heat shock factor binding protein 1 L homeolog
Names
heat shock factor binding protein 1 a

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112810.1 → NP_001106281.1  heat shock factor binding protein 1 L homeolog

    See identical proteins and their annotated locations for NP_001106281.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133779
    UniProtKB/TrEMBL
    A4FVE5
    Conserved Domains (1) summary
    pfam06825
    Location:12 → 60
    HSBP1; Heat shock factor binding protein 1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    56609988..56617124
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018256326.2 → XP_018111815.1  heat shock factor binding protein 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0USB3
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.