Cd300ld4 CD300 molecule like family member D4 [Mus musculus (house mouse)] - Gene

Summary

Official Symbol: Cd300ld4provided by MGI
Official Full Name: CD300 molecule like family member D4provided by MGI
Primary source: MGI:MGI:3702658
See related: Ensembl:ENSMUSG00000069609 AllianceGenome:MGI:3702658
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Mus musculus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as: Gm11710
Summary: Predicted to enable transmembrane signaling receptor activity. Predicted to be active in plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression: Biased expression in mammary gland adult (RPKM 25.1), subcutaneous fat pad adult (RPKM 13.1) and 11 other tissues See more
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Genomic context

Location:: 11 E2; 11 80.57 cM

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	GRCm39 (GCF_000001635.27)	11	NC_000077.7 (114892491..114918301, complement)
108.20200622	previous assembly	GRCm38.p6 (GCF_000001635.26)	11	NC_000077.6 (115003951..115027070, complement)

Chromosome 11 - NC_000077.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Mouse ENCODE transcriptome data
Description: RNA profiling data sets generated by the Mouse ENCODE project.
BioProject: PRJNA66167
Publication: PMID 25409824
Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by MGI

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info
enables transmembrane signaling receptor activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in plasma membrane	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: CD300 molecule like family member D4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001101656.2 → NP_001095126.1 CD300 molecule like family member D4 precursor

See identical proteins and their annotated locations for NP_001095126.1

Status: PROVISIONAL

Source sequence(s)

AL607025

Consensus CDS

CCDS36368.1

UniProtKB/TrEMBL

A2A7W0, A2A7W1, D3Z6G8, D3Z6G9

Related

ENSMUSP00000097811.3, ENSMUST00000100240.3

Conserved Domains (2) summary

cd05716
Location:27 → 124

Ig_pIgR; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR)

smart00410
Location:25 → 125

IG_like; Immunoglobulin like

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

NC_000077.7 Reference GRCm39 C57BL/6J

Range

114892491..114918301 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_036156167.1 → XP_036012060.1 CD300 molecule like family member D4 isoform X3

Conserved Domains (1) summary

cd05716
Location:23 → 124

IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
XM_036156165.1 → XP_036012058.1 CD300 molecule like family member D4 isoform X1

Conserved Domains (1) summary

cd05716
Location:23 → 124

IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
XM_036156166.1 → XP_036012059.1 CD300 molecule like family member D4 isoform X2

Conserved Domains (1) summary

cd05716
Location:23 → 124

IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
XM_036156164.1 → XP_036012057.1 CD300 molecule like family member D4 isoform X1

Conserved Domains (1) summary

cd05716
Location:23 → 124

IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
XM_036156168.1 → XP_036012061.1 CD300 molecule like family member D4 isoform X4

Conserved Domains (1) summary

cd05716
Location:23 → 124

IgV_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar proteins
XM_017314198.3 → XP_017169687.1 CD300 molecule like family member D4 isoform X5

Conserved Domains (1) summary

cd05716
Location:27 → 124

Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains
XM_006531879.5 → XP_006531942.1 CD300 molecule like family member D4 isoform X6

See identical proteins and their annotated locations for XP_006531942.1

Conserved Domains (1) summary

cd05716
Location:27 → 124

Ig_pIgR_like; Immunoglobulin (Ig)-like domain in the polymeric Ig receptor (pIgR) and similar domains