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Apol7d apolipoprotein L 7d [ Mus musculus (house mouse) ]

Gene ID: 100042814, updated on 22-Oct-2024

Summary

Official Symbol
Apol7dprovided by MGI
Official Full Name
apolipoprotein L 7dprovided by MGI
Primary source
MGI:MGI:3723449
See related
Ensembl:ENSMUSG00000073652 AllianceGenome:MGI:3723449
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm15456
Expression
Low expression observed in reference dataset See more
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Genomic context

See Apol7d in Genome Data Viewer
Location:
1 C3; 1 36.1 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (71692494..71702002)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (71653335..71662843)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E5770 Neighboring gene 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase Neighboring gene fibronectin 1 Neighboring gene STARR-seq mESC enhancer starr_01248 Neighboring gene STARR-seq mESC enhancer starr_01250 Neighboring gene PRP4 pre-mRNA processing factor 4 homolog pseudogene Neighboring gene GABA(A) receptor-associated protein like 2 pseudogene 1_652.1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_040308.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK049041
    Related
    ENSMUST00000126516.4

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    71692494..71702002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)