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Defa-ps17 defensin, alpha, pseudogene 17 [ Mus musculus (house mouse) ]

Gene ID: 100040693, updated on 17-Aug-2024

Summary

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Official Symbol
Defa-ps17provided by MGI
Official Full Name
defensin, alpha, pseudogene 17provided by MGI
Primary source
MGI:MGI:3705788
See related
Ensembl:ENSMUSG00000095925 AllianceGenome:MGI:3705788
Gene type
pseudo
RefSeq status
INFERRED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm15307
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Genomic context

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See Defa-ps17 in Genome Data Viewer
Location:
8 A2; 8 10.35 cM
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (21963252..21963453)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (21473236..21473437)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 23568 Neighboring gene defensin, alpha, 42 Neighboring gene zinc finger, MYM-type 5 pseudogene Neighboring gene defensin, alpha, 20 Neighboring gene defensin, alpha, 32

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual annotation and analysis of the defensin gene cluster in the C57BL/6J mouse reference genome. Amid C, et al. BMC Genomics, 2009 Dec 15. PMID 20003482, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • defensin, alpha pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016318.3 

    Range
    101..302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    21963252..21963453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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