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Gm2848 predicted gene 2848 [ Mus musculus (house mouse) ]

Gene ID: 100040572, updated on 17-Aug-2024

Summary

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Official Symbol
Gm2848provided by MGI
Official Full Name
predicted gene 2848provided by MGI
Primary source
MGI:MGI:3781020
See related
Ensembl:ENSMUSG00000120488 AllianceGenome:MGI:3781020
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Low expression observed in reference dataset See more
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Genomic context

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See Gm2848 in Genome Data Viewer
Location:
13 A5; 13
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (52723916..52727261, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (52569880..52573225, complement)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene DIRAS family, GTP-binding RAS-like 2 Neighboring gene STARR-seq mESC enhancer starr_34549 Neighboring gene predicted gene, 33168 Neighboring gene STARR-positive B cell enhancer ABC_E2407 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:52678844-52678953 Neighboring gene STARR-seq mESC enhancer starr_34550 Neighboring gene STARR-positive B cell enhancer ABC_E7238 Neighboring gene spleen tyrosine kinase Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:52797592-52797775 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:52816883-52817066 Neighboring gene expressed sequence BB123696

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046069.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BC065398
    Related
    ENSMUST00000243659.1

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    52723916..52727261 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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