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Gm10486 predicted gene 10486 [ Mus musculus (house mouse) ]

Gene ID: 100039550, updated on 17-Aug-2024

Summary

Official Symbol
Gm10486provided by MGI
Official Full Name
predicted gene 10486provided by MGI
Primary source
MGI:MGI:3710516
See related
Ensembl:ENSMUSG00000073247 AllianceGenome:MGI:3710516
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 2.9) See more
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Genomic context

See Gm10486 in Genome Data Viewer
Location:
X A3.3; X 20.11 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (34331037..34353969)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (35067384..35090316)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 42403 Neighboring gene predicted gene 2288 Neighboring gene predicted gene 2309 Neighboring gene predicted gene 2318

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
uncharacterized protein LOC100039550
Names
Xlr-related, meiosis regulated Xmr

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001109970.1NP_001103440.1  uncharacterized protein LOC100039550

    See identical proteins and their annotated locations for NP_001103440.1

    Status: VALIDATED

    Source sequence(s)
    BX324174
    Consensus CDS
    CCDS40921.1
    UniProtKB/TrEMBL
    Q62478
    Related
    ENSMUSP00000099170.4, ENSMUST00000101647.4
    Conserved Domains (1) summary
    pfam04803
    Location:130209
    Cor1; Cor1/Xlr/Xmr conserved region

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    34331037..34353969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)