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daxx death-associated protein 6 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100038126, updated on 18-Sep-2024

Summary

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Official Symbol
daxxprovided by Xenbase
Official Full Name
death-associated protein 6provided by Xenbase
Primary source
Xenbase:XB-GENE-492953
See related
Ensembl:ENSXETG00000020372
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
dap6; bing2
Orthologs
human mouse all
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Genomic context

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See daxx in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (72190294..72205156, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (51104014..51125705, complement)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene TAP binding protein (tapasin) Neighboring gene zinc finger and BTB domain containing 22 Neighboring gene kinesin family member C1 Neighboring gene uncharacterized protein MGC147402 Neighboring gene retinoid X receptor beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within apoptotic process IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within chromatin organization IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in PML body IEA
Inferred from Electronic Annotation
more info
  
located_in chromosome IEA
Inferred from Electronic Annotation
more info
  
located_in chromosome, centromeric region IEA
Inferred from Electronic Annotation
more info
  
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
  
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
death domain-associated protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    72190294..72205156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002938667.5 → XP_002938713.2  death domain-associated protein 6

    UniProtKB/TrEMBL
    A0A6I8R686, F6RWB7
    Related
    ENSXETP00000043970.4, ENSXETT00000043970.5
    Conserved Domains (2) summary
    cd13150
    Location:170 → 373
    DAXX_histone_binding; Histone binding domain of the death-domain associated protein (DAXX)
    cl23986
    Location:40 → 131
    DAXX_helical_bundle; Helical bundle domain of the death-domain associated protein (DAXX)

  2. XM_031891002.1 → XP_031746862.1  death domain-associated protein 6

    UniProtKB/TrEMBL
    A0A6I8R686, F6RWB7
    Conserved Domains (2) summary
    cd13150
    Location:170 → 373
    DAXX_histone_binding; Histone binding domain of the death-domain associated protein (DAXX)
    cl23986
    Location:40 → 131
    DAXX_helical_bundle; Helical bundle domain of the death-domain associated protein (DAXX)
Nucleotide Protein Strain
Heading Accession and Version

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