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rnasek.S ribonuclease K S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100037220, updated on 4-Nov-2024

Summary

Official Symbol
rnasek.S
Official Full Name
ribonuclease K S homeolog
Primary source
Xenbase:XB-GENE-6254981
Locus tag
XELAEV_18000843mg
See related
AllianceGenome:Xenbase:XB-GENE-6254981
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
rnasek; rnasek-a; rnasek-b
Summary
Predicted to enable RNA endonuclease activity. Predicted to be located in membrane. Orthologous to human RNASEK (ribonuclease K). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See rnasek.S in Genome Data Viewer
Location:
chromosome: 3S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3S NC_054376.1 (126620134..126623212)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694811.1 (3125661..3128709)

Chromosome 3S - NC_054376.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108703506 Neighboring gene arrestin beta 2 S homeolog Neighboring gene BPTF associated chromatin complex component 1 S homeolog Neighboring gene P2Y purinoceptor 4

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
enables RNA endonuclease activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ribonuclease kappa-A
Names
RNase K-A
RNase kappa-A
ribonuclease kappa
ribonuclease, RNase K S homeolog
rnase kappa
NP_001091376.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097907.1NP_001091376.1  ribonuclease kappa-A

    See identical proteins and their annotated locations for NP_001091376.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129756
    UniProtKB/Swiss-Prot
    A2VDC7

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054376.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    126620134..126623212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)