wdr74.L WD repeat domain 74 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: wdr74.L
Official Full Name: WD repeat domain 74 L homeolog
Primary source: Xenbase:XB-GENE-969807
Locus tag: XELAEV_18022242mg
See related: EnsemblRapid:ENSXLAG00005019761 AllianceGenome:Xenbase:XB-GENE-969807
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: wdr74
Summary: Predicted to act upstream of or within ribosomal large subunit biogenesis. Predicted to be located in nucleolus. Predicted to be part of preribosome, large subunit precursor. Orthologous to human WDR74 (WD repeat domain 74). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 4L

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4L	NC_054377.1 (27634087..27641713, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4L	NC_030730.1 (26113838..26121521, complement)

Chromosome 4L - NC_054377.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Process	Evidence Code	Pubs
acts_upstream_of_or_within ribosomal large subunit biogenesis	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in nucleolus	IEA Inferred from Electronic Annotation more info
part_of preribosome, large subunit precursor	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: WD repeat domain 74 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001097880.1 → NP_001091349.1 WD repeat domain 74 L homeolog

See identical proteins and their annotated locations for NP_001091349.1

Status: PROVISIONAL

Source sequence(s)

BC129603

UniProtKB/TrEMBL

A0A974D2T6, A2VD86

Related

ENSXLAP00005058019.1, ENSXLAT00005059376.1

Conserved Domains (3) summary

COG2319
Location:37 → 315

WD40; WD40 repeat [General function prediction only]

sd00039
Location:180 → 218

7WD40; WD40 repeat [structural motif]

cl02567
Location:4 → 288

WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

27634087..27641713 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)