calhm6.L calcium homeostasis modulator family member 6 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: calhm6.L
Official Full Name: calcium homeostasis modulator family member 6 L homeolog
Primary source: Xenbase:XB-GENE-991403
Locus tag: XELAEV_18027149mg
See related: EnsemblRapid:ENSXLAG00005033983 AllianceGenome:Xenbase:XB-GENE-991403
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: fam26f; fam26f.L
Summary: Predicted to enable monoatomic cation channel activity. Predicted to act upstream of or within ATP export and monoatomic ion transport. Predicted to be located in membrane. Orthologous to human CALHM6 (calcium homeostasis modulator family member 6). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

Location:: chromosome: 5L

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (78161670..78166777, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (75941016..75944692, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables monoatomic cation channel activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within ATP export	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within monoatomic ion transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC100037121

Names: family with sequence similarity 26 member F L homeolog; family with sequence similarity 26, member F

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001097831.1 → NP_001091300.2 uncharacterized protein LOC100037121

Status: PREDICTED

Source sequence(s)

BC131889

UniProtKB/TrEMBL

A0A8J0Q576

Related

ENSXLAP00005101454.1, ENSXLAT00005103431.1

Conserved Domains (1) summary

pfam14798
Location:4 → 249

Ca_hom_mod; Calcium homeostasis modulator

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

78161670..78166777 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041562020.1 → XP_041417954.1 uncharacterized protein LOC100037121 isoform X1

UniProtKB/TrEMBL

A0A1L8G8P4, A0A974HJI4

Conserved Domains (1) summary

pfam14798
Location:2 → 249

Ca_hom_mod; Calcium homeostasis modulator