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timm17a.L translocase of inner mitochondrial membrane 17A L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100037113, updated on 4-Nov-2024

Summary

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Official Symbol
timm17a.L
Official Full Name
translocase of inner mitochondrial membrane 17A L homeolog
Primary source
Xenbase:XB-GENE-17336943
Locus tag
XELAEV_18012178mg
See related
AllianceGenome:Xenbase:XB-GENE-17336943
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
tim17; tim17a
Summary
Predicted to enable protein transmembrane transporter activity. Predicted to act upstream of or within protein import into mitochondrial matrix. Predicted to be located in mitochondrial inner membrane. Predicted to be part of TIM23 mitochondrial import inner membrane translocase complex. Orthologous to human TIMM17A (translocase of inner mitochondrial membrane 17A). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See timm17a.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (64800121..64808213)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (62108052..62115778)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene importin 9 L homeolog Neighboring gene uncharacterized LOC121399946 Neighboring gene leiomodin 1 L homeolog Neighboring gene SFT2 domain containing 2 L homeolog Neighboring gene chromosome 2 C3orf52 homolog L homeolog Neighboring gene DEAD-box helicase 52 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables protein transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein import into mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
part_of TIM23 mitochondrial import inner membrane translocase complex IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC100037113

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097823.1 → NP_001091292.1  uncharacterized protein LOC100037113

    See identical proteins and their annotated locations for NP_001091292.1

    Status: PREDICTED

    Source sequence(s)
    BC128969
    UniProtKB/TrEMBL
    A0A974HY52, A2BD77, Q5XG29
    Conserved Domains (1) summary
    cl02381
    Location:1 → 167
    Tim17; Tim17/Tim22/Tim23/Pmp24 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    64800121..64808213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041580753.1 → XP_041436687.1  uncharacterized protein LOC100037113 isoform X1

    UniProtKB/TrEMBL
    A0A8J1M4R1
    Conserved Domains (1) summary
    cl02381
    Location:49 → 206
    Tim17; Tim17/Tim22/Tim23/Pmp24 family
Nucleotide Protein Strain
Heading Accession and Version

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