brk1.S BRICK1, SCAR/WAVE actin-nucleating complex subunit S homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: brk1.S
Official Full Name: BRICK1, SCAR/WAVE actin-nucleating complex subunit S homeolog
Primary source: Xenbase:XB-GENE-1009803
Locus tag: XELAEV_18025828mg
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: brk1; brick1; brk1-a; brk1-b; c3orf10
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Genomic context

Location:: chromosome: 4S

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	4S	NC_054378.1 (107802024..107812040, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	4S	NC_030731.1 (101352545..101362561, complement)

Chromosome 4S - NC_054378.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables protein-containing complex binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within actin filament organization	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within cell motility	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within regulation of actin polymerization or depolymerization	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of SCAR complex	IEA Inferred from Electronic Annotation more info
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in cytoskeleton	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: probable protein BRICK1-B

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001171700.1 → NP_001165171.1 probable protein BRICK1-B

See identical proteins and their annotated locations for NP_001165171.1

Status: PROVISIONAL

Source sequence(s)

BC128952

UniProtKB/Swiss-Prot

A2BD66

UniProtKB/TrEMBL

A0A974D2R5, A0A974D329

Conserved Domains (1) summary

pfam10152
Location:33 → 67

DUF2360; Predicted coiled-coil domain-containing protein (DUF2360)

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

107802024..107812040 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)