plekhf2.L pleckstrin homology and FYVE domain containing 2 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: plekhf2.L
Official Full Name: pleckstrin homology and FYVE domain containing 2 L homeolog
Primary source: Xenbase:XB-GENE-959916
Locus tag: XELAEV_18032243mg
See related: EnsemblRapid:ENSXLAG00005027363
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: plekhf2
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Genomic context

Location:: chromosome: 6L

Exon count:: 2

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	6L	NC_054381.1 (140922429..140934553, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	6L	NC_030734.1 (131741960..131754378, complement)

Chromosome 6L - NC_054381.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables metal ion binding	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: pleckstrin homology and FYVE domain containing 2 L homeolog

Names: pleckstrin homology domain containing, family F (with FYVE domain) member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001097716.1 → NP_001091185.1 pleckstrin homology and FYVE domain containing 2 L homeolog

See identical proteins and their annotated locations for NP_001091185.1

Status: PROVISIONAL

Source sequence(s)

BC129700

UniProtKB/TrEMBL

A0A974CQZ3, A1L2T5

Related

ENSXLAP00005081436.1, ENSXLAT00005083048.1

Conserved Domains (3) summary

cd01218
Location:7 → 129

PH_Phafin2-like; Phafin2 (also called EAPF, FLJ13187, ZFYVE18 or PLEKHF2) Pleckstrin Homology (PH) domain

cd15755
Location:148 → 211

FYVE_PKHF2; FYVE domain found in protein containing both PH and FYVE domains 2 (phafin-2) and similar proteins

pfam00169
Location:39 → 130

PH; PH domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

140922429..140934553 complement

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GenBank, FASTA, Sequence Viewer (Graphics)