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LOC100036895 uncharacterized LOC100036895 [ Xenopus laevis (African clawed frog) ]

Gene ID: 100036895, updated on 10-Mar-2023

Summary

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Gene symbol
LOC100036895
Gene description
uncharacterized LOC100036895
Locus tag
XELAEV_18016550mg
See related
EnsemblRapid:ENSXLAG00005014155
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See LOC100036895 in Genome Data Viewer
Location:
chromosome: 2S
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (168493557..168533520)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (159016530..159020556)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene ADP-ribosyltransferase 5 S homeolog Neighboring gene erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase-like Neighboring gene erythroblast NAD(P)(+)--arginine ADP-ribosyltransferase Neighboring gene ADP-ribosyltransferase 1 S homeolog Neighboring gene protein sel-1 homolog 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
NAD(P)(+)--arginine ADP-ribosyltransferase 2-like; uncharacterized protein LOC100036895
NP_001091143.1
XP_041438842.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097674.1 → NP_001091143.1  NAD(P)(+)--arginine ADP-ribosyltransferase 2-like precursor

    See identical proteins and their annotated locations for NP_001091143.1

    Status: PROVISIONAL

    Source sequence(s)
    BC129610
    UniProtKB/TrEMBL
    A1L2M7
    Conserved Domains (1) summary
    cl00173
    Location:44 → 264
    VIP2; VIP2; A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    168493557..168533520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041582908.1 → XP_041438842.1  uncharacterized protein LOC100036895 isoform X1

    UniProtKB/TrEMBL
    A0A1L8HBU4, A0A974HXG9
    Related
    ENSXLAP00005041648.1, ENSXLAT00005042632.1
    Conserved Domains (1) summary
    cl00173
    Location:44 → 264
    VIP2; A family of actin-ADP-ribosylating toxin. A member of the Bacillus-prodiced vegetative insecticidal proteins (VIPs) possesses high specificity against the major insect pest, corn rootworms, and belongs to a classs of binary toxins and regulators of ...
Nucleotide Protein Strain
Heading Accession and Version

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