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cyp4b1.5.L cytochrome P450 family 4 subfamily B member 1 gene 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100036876, updated on 4-Nov-2024

Summary

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Symbol
cyp4b1.5.L
Full Name
cytochrome P450 family 4 subfamily B member 1 gene 5 L homeolog
Primary source
Xenbase:XB-GENE-6465965
Locus tag
XELAEV_18023137mg
See related
AllianceGenome:Xenbase:XB-GENE-6465965
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
CYP4T7; XB5810926; XB5810926.L; LOC100488227.L
Summary
Predicted to enable several functions, including heme binding activity; iron ion binding activity; and monooxygenase activity. Predicted to be located in membrane. Orthologous to human CYP4B1 (cytochrome P450 family 4 subfamily B member 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cyp4b1.5.L in Genome Data Viewer
Location:
chromosome: 4L
Exon count:
12
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4L NC_054377.1 (88915472..88929631)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4L NC_030730.1 (83619332..83633491)

Chromosome 4L - NC_054377.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 3 L homeolog Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 4 L homeolog Neighboring gene cytochrome P450 family 4 subfamily B member 1 gene 6 L homeolog Neighboring gene pdzk1 interacting protein 1 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of multiple cytochrome P450 genes belonging to the CYP4 family in Xenopus laevis: cDNA cloning of CYP4F42 and CYP4V4. Fujita Y, et al. Comp Biochem Physiol B Biochem Mol Biol, 2004 Jun. PMID 15193267
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
  
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
  
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC100036876
Names
cytochrome P450 4B1-like L homeolog
provisional ortholog of cytochrome P450 family 4 subfamily B member 1 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001097657.1 → NP_001091126.1  uncharacterized protein LOC100036876

    See identical proteins and their annotated locations for NP_001091126.1

    Status: PREDICTED

    Source sequence(s)
    BC129577
    UniProtKB/TrEMBL
    A0A974HPE8, A1L2K6
    Conserved Domains (1) summary
    pfam00067
    Location:48 → 502
    p450; Cytochrome P450

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054377.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    88915472..88929631
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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