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cox7a2.L cytochrome c oxidase subunit 7A2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 100036781, updated on 4-Nov-2024

Summary

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Official Symbol
cox7a2.L
Official Full Name
cytochrome c oxidase subunit 7A2 L homeolog
Primary source
Xenbase:XB-GENE-6251439
Locus tag
XELAEV_18002131mg
See related
AllianceGenome:Xenbase:XB-GENE-6251439
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
viial; cox7al; cox7a2b; cox7al1; cox7a2-a; cox7a2-b; coxviial; coxviia-l
Summary
Predicted to act upstream of or within mitochondrial electron transport, cytochrome c to oxygen; mitochondrial respirasome assembly; and regulation of oxidative phosphorylation. Predicted to be located in mitochondrial inner membrane. Predicted to be part of respiratory chain complex IV. Orthologous to human COX7A2 (cytochrome c oxidase subunit 7A2). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cox7a2.L in Genome Data Viewer
Location:
chromosome: 5L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 5L NC_054379.1 (95433676..95439839)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694819.1 (1682593..1688752, complement)

Chromosome 5L - NC_054379.1Genomic Context describing neighboring genes Neighboring gene filamin A interacting protein 1 L homeolog Neighboring gene transmembrane protein 30A L homeolog Neighboring gene collagen, type XII, alpha 1 L homeolog Neighboring gene CD109 molecule L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial electron transport, cytochrome c to oxygen IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within mitochondrial respirasome assembly IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within regulation of oxidative phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  
part_of respiratory chain complex IV IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cytochrome c oxidase subunit 7A2 L homeolog
Names
cytochrome c oxidase subunit VIIa polypeptide 2 (liver) L homeolog
cytochrome c oxidase subunit VIIa polypeptide 2 (liver) b
NP_001106275.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001112804.1 → NP_001106275.1  cytochrome c oxidase subunit 7A2 L homeolog

    See identical proteins and their annotated locations for NP_001106275.1

    Status: PROVISIONAL

    Source sequence(s)
    BC124973
    UniProtKB/TrEMBL
    A0AUU3
    Conserved Domains (1) summary
    cd00928
    Location:24 → 78
    Cyt_c_Oxidase_VIIa; Cytochrome c oxidase subunit VIIa. Cytochrome c oxidase (CcO), the terminal oxidase in the respiratory chains of eukaryotes and most bacteria, is a multi-chain transmembrane protein located in the inner membrane of mitochondria and the cell membrane of ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95433676..95439839
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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