tor2a torsin family 2, member A [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: tor2aprovided by Xenbase
Official Full Name: torsin family 2, member Aprovided by Xenbase
Primary source: Xenbase:XB-GENE-5806617
See related: Ensembl:ENSXETG00000005251 AllianceGenome:Xenbase:XB-GENE-5806617
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Summary: Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to act upstream of or within chaperone cofactor-dependent protein refolding. Predicted to be located in endoplasmic reticulum lumen. Orthologous to human TOR2A (torsin family 2 member A). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 2

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	2	NC_030678.2 (86432435..86447834)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	2	NC_030678.1 (82273163..82287789)

Chromosome 2 - NC_030678.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info
enables ATP hydrolysis activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within chaperone cofactor-dependent protein refolding	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in endomembrane system	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum lumen	IEA Inferred from Electronic Annotation more info
located_in intracellular membrane-bounded organelle	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: prosalusin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001097160.1 → NP_001090629.1 prosalusin precursor

See identical proteins and their annotated locations for NP_001090629.1

Status: PROVISIONAL

Source sequence(s)

CR761508

UniProtKB/TrEMBL

F6ULT9, F7AYI4, Q28G83

Related

ENSXETP00000011473.2, ENSXETT00000011473.4

Conserved Domains (1) summary

pfam06309
Location:35 → 153

Torsin

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

Range

86432435..86447834

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_031895540.1 → XP_031751400.1 prosalusin isoform X1

UniProtKB/TrEMBL

A0A8J1J2Z9

Conserved Domains (1) summary

pfam06309
Location:5 → 114

Torsin