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mir187 microRNA 187 [ Danio rerio (zebrafish) ]

Gene ID: 100033764, updated on 2-Nov-2024

Summary

Official Symbol
mir187provided by ZNC
Official Full Name
microRNA 187provided by ZNC
Primary source
ZFIN:ZDB-MIRNAG-041228-6
See related
Ensembl:ENSDARG00000082677 miRBase:MI0001370; AllianceGenome:ZFIN:ZDB-MIRNAG-041228-6
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
mir-187-1; mir-187-2; dre-mir-187; dre-mir-187-1
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See mir187 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (34135607..34135695)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (34548487..34548575)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:dkey-184p18.2 Neighboring gene RP9 pre-mRNA splicing factor Neighboring gene uncharacterized LOC137488534 Neighboring gene uncharacterized LOC108180076 Neighboring gene POC1 centriolar protein homolog B (Chlamydomonas), like

Genomic regions, transcripts, and products

General gene information

Other Names

  • miR-187
  • mirn187

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_029929.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    CU571256
    Related
    ENSDART00000116600.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    34135607..34135695
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)