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mirlet7j microRNA let7j [ Danio rerio (zebrafish) ]

Gene ID: 100033723, updated on 2-Nov-2024

Summary

Official Symbol
mirlet7jprovided by ZNC
Official Full Name
microRNA let7jprovided by ZNC
Primary source
ZFIN:ZDB-MIRNAG-081203-24
See related
Ensembl:ENSDARG00000080515 miRBase:MI0003343; AllianceGenome:ZFIN:ZDB-MIRNAG-081203-24
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
let-7j; miR-let7j; dre-let-7j
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See mirlet7j in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 6 NC_007117.7 (41454791..41454873)
105 previous assembly GRCz10 (GCF_000002035.5) 6 NC_007117.6 (41457255..41457337)

Chromosome 6 - NC_007117.7Genomic Context describing neighboring genes Neighboring gene Ca2+-dependent activator protein for secretion b Neighboring gene uncharacterized LOC100536148 Neighboring gene ciliogenesis and planar polarity effector 2 Neighboring gene WD repeat domain 82 Neighboring gene twinfilin actin binding protein 2 Neighboring gene cytokine inducible SH2-containing protein a

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_030245.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL935208
    Related
    ENSDART00000117363.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007117.7 Reference GRCz11 Primary Assembly

    Range
    41454791..41454873
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)