Format

Send to:

Choose Destination

CNBP CCHC-type zinc finger nucleic acid binding protein [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100028365, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
CNBP
Gene description
CCHC-type zinc finger nucleic acid binding protein
See related
EnsemblRapid:ENSMODG00000075617
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CNBP in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 7 NC_077233.1 (63608582..63716879)
103 previous assembly MonDom5 (GCF_000002295.2) 6 NC_008806.1 (253749539..253846105)

Chromosome 7 - NC_077233.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130455460 Neighboring gene 5-hydroxymethylcytosine binding, ES cell specific Neighboring gene COPI coat complex subunit gamma 1 Neighboring gene uncharacterized LOC103103773 Neighboring gene ISY1 splicing factor homolog Neighboring gene RAB43, member RAS oncogene family

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables single-stranded RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cytoplasmic translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CCHC-type zinc finger nucleic acid binding protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077233.1 Reference mMonDom1.pri

    Range
    63608582..63716879
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056804772.1 → XP_056660750.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

  2. XM_056804761.1 → XP_056660739.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  3. XM_001378376.5 → XP_001378413.2  CCHC-type zinc finger nucleic acid binding protein isoform X2

    See identical proteins and their annotated locations for XP_001378413.2

    UniProtKB/TrEMBL
    F7EJM5
    Related
    ENSMODP00000073098.1, ENSMODT00000113178.1
    Conserved Domains (1) summary
    PTZ00368
    Location:54 → 171
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  4. XM_003341764.4 → XP_003341812.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

    See identical proteins and their annotated locations for XP_003341812.1

    Related
    ENSMODP00000039817.2, ENSMODT00000042922.3
    Conserved Domains (1) summary
    PTZ00368
    Location:47 → 164
    PTZ00368; universal minicircle sequence binding protein (UMSBP); Provisional

  5. XM_056804758.1 → XP_056660736.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  6. XM_056804767.1 → XP_056660745.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

  7. XM_056804765.1 → XP_056660743.1  CCHC-type zinc finger nucleic acid binding protein isoform X2

    UniProtKB/TrEMBL
    F7EJM5

  8. XM_056804760.1 → XP_056660738.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  9. XM_056804759.1 → XP_056660737.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  10. XM_056804762.1 → XP_056660740.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  11. XM_056804757.1 → XP_056660735.1  CCHC-type zinc finger nucleic acid binding protein isoform X1

  12. XM_056804766.1 → XP_056660744.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

  13. XM_056804763.1 → XP_056660741.1  CCHC-type zinc finger nucleic acid binding protein isoform X2

    UniProtKB/TrEMBL
    F7EJM5
    Related
    ENSMODP00000075538.1, ENSMODT00000122814.1

  14. XM_056804770.1 → XP_056660748.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

  15. XM_056804764.1 → XP_056660742.1  CCHC-type zinc finger nucleic acid binding protein isoform X2

    UniProtKB/TrEMBL
    F7EJM5

  16. XM_056804771.1 → XP_056660749.1  CCHC-type zinc finger nucleic acid binding protein isoform X4

    Related
    ENSMODP00000073195.1, ENSMODT00000150240.1

  17. XM_056804769.1 → XP_056660747.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

  18. XM_056804768.1 → XP_056660746.1  CCHC-type zinc finger nucleic acid binding protein isoform X3

RNA

  1. XR_008913442.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.