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HS3ST5 heparan sulfate-glucosamine 3-sulfotransferase 5 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100022809, updated on 8-May-2024

Summary

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Gene symbol
HS3ST5
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 5
See related
EnsemblRapid:ENSMODG00000036869
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See HS3ST5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 2 NC_077228.1 (381175456..381477857, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 2 NC_008802.1 (381491317..381792558, complement)

Chromosome 2 - NC_077228.1Genomic Context describing neighboring genes Neighboring gene myristoylated alanine rich protein kinase C substrate Neighboring gene histone deacetylase 2 Neighboring gene uncharacterized LOC103103899 Neighboring gene microRNA mir-12330 Neighboring gene WASH complex subunit 3-like Neighboring gene 40S ribosomal protein S17-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 5
Names
heparan sulfate (glucosamine) 3-O-sulfotransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077228.1 Reference mMonDom1.pri

    Range
    381175456..381477857 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007484451.3 → XP_007484513.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    See identical proteins and their annotated locations for XP_007484513.1

    UniProtKB/TrEMBL
    A0A5F8G6D9
    Related
    ENSMODP00000042999.1, ENSMODT00000078295.2
    Conserved Domains (1) summary
    pfam00685
    Location:89 → 329
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_007484453.2 → XP_007484515.1  heparan sulfate glucosamine 3-O-sulfotransferase 5

    See identical proteins and their annotated locations for XP_007484515.1

    UniProtKB/TrEMBL
    A0A5F8G6D9
    Conserved Domains (1) summary
    pfam00685
    Location:89 → 329
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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