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LOC100021269 zinc finger matrin-type protein 2 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100021269, updated on 8-May-2024

Summary

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Gene symbol
LOC100021269
Gene description
zinc finger matrin-type protein 2
See related
EnsemblRapid:ENSMODG00000077057
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Also known as
ZMAT2
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Genomic context

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See LOC100021269 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (339047302..339054071)
103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (332342021..332349335)

Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene histidyl-tRNA synthetase 2, mitochondrial Neighboring gene zinc finger matrin-type protein 2 Neighboring gene uncharacterized LOC103103066 Neighboring gene uncharacterized LOC103102880 Neighboring gene palmitoyltransferase ZDHHC17-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 2
Names
zinc finger, matrin-type 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077227.1 Reference mMonDom1.pri

    Range
    339047302..339054071
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001368719.5 → XP_001368756.2  zinc finger matrin-type protein 2

    Related
    ENSMODP00000048043.2, ENSMODT00000088321.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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