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ZMAT5 zinc finger matrin-type 5 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100018335, updated on 8-May-2024

Summary

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Gene symbol
ZMAT5
Gene description
zinc finger matrin-type 5
See related
EnsemblRapid:ENSMODG00000009007
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See ZMAT5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (21521387..21545530)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (518377761..518402669, complement)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC130458192 Neighboring gene cytochrome b-c1 complex subunit 9 Neighboring gene calcium binding protein 7 Neighboring gene uncharacterized LOC103103858 Neighboring gene NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U12-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    21521387..21545530
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056821528.1 → XP_056677506.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    F7BPY5

  2. XM_016432540.2 → XP_016288026.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    F7BPY5
    Conserved Domains (2) summary
    cl22907
    Location:4 → 59
    zf-U1; U1 zinc finger
    pfam00642
    Location:55 → 76
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  3. XM_007490520.3 → XP_007490582.1  zinc finger matrin-type protein 5

    See identical proteins and their annotated locations for XP_007490582.1

    UniProtKB/TrEMBL
    F7BPY5
    Conserved Domains (2) summary
    cl22907
    Location:4 → 59
    zf-U1; U1 zinc finger
    pfam00642
    Location:55 → 76
    zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)

  4. XM_056821530.1 → XP_056677508.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    F7BPY5

  5. XM_056821529.1 → XP_056677507.1  zinc finger matrin-type protein 5

    UniProtKB/TrEMBL
    F7BPY5
    Related
    ENSMODP00000011230.1, ENSMODT00000011448.4
Nucleotide Protein
Heading Accession and Version

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