U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCRIB scribble planar cell polarity protein [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100016936, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
SCRIB
Gene description
scribble planar cell polarity protein
See related
EnsemblRapid:ENSMODG00000009102
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 3
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 3 NC_077229.1 (101427674..101509431, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 3 NC_008803.1 (434400604..434482105, complement)

Chromosome 3 - NC_077229.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 83 member H Neighboring gene IQ motif and ankyrin repeat containing 1 Neighboring gene trafficking protein particle complex subunit 6B-like Neighboring gene uncharacterized LOC103103137 Neighboring gene poly(U) binding splicing factor 60 Neighboring gene nuclear receptor binding protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in neurotransmitter receptor transport postsynaptic membrane to endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neurotransmitter receptor transport, endosome to postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein scribble homolog
Names
scribbled planar cell polarity protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077229.1 Reference mMonDom1.pri

    Range
    101427674..101509431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056822833.1 → XP_056678811.1  protein scribble homolog isoform X25

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000083958.1, ENSMODT00000128016.1

  2. XM_056822837.1 → XP_056678815.1  protein scribble homolog isoform X29

    UniProtKB/TrEMBL
    F7FCH6

  3. XM_016432009.2 → XP_016287495.1  protein scribble homolog isoform X13

    UniProtKB/TrEMBL
    A0A5F8G2B9

  4. XM_016432002.2 → XP_016287488.1  protein scribble homolog isoform X4

    UniProtKB/TrEMBL
    A0A5F8H9M2
    Related
    ENSMODP00000077234.1, ENSMODT00000099991.1

  5. XM_016432004.2 → XP_016287490.1  protein scribble homolog isoform X7

    UniProtKB/TrEMBL
    A0A5F8G2B9

  6. XM_016432012.2 → XP_016287498.1  protein scribble homolog isoform X18

    UniProtKB/TrEMBL
    F7FCH6

  7. XM_007488684.3 → XP_007488746.1  protein scribble homolog isoform X3

    UniProtKB/TrEMBL
    F7FCH6
    Conserved Domains (7) summary
    smart00228
    Location:719 → 807
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00116
    Location:12 → 241
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00992
    Location:987 → 1075
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:289 → 329
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:128 → 186
    LRR_8; Leucine rich repeat
    pfam16182
    Location:1761 → 1851
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  8. XM_016432013.2 → XP_016287499.1  protein scribble homolog isoform X21

    UniProtKB/TrEMBL
    F7FCH6

  9. XM_016432010.2 → XP_016287496.1  protein scribble homolog isoform X15

    UniProtKB/TrEMBL
    F7FCH6

  10. XM_016432001.2 → XP_016287487.1  protein scribble homolog isoform X2

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000089018.1, ENSMODT00000098914.1

  11. XM_016432000.2 → XP_016287486.1  protein scribble homolog isoform X1

    UniProtKB/TrEMBL
    F7FCH6

  12. XM_007488689.3 → XP_007488751.1  protein scribble homolog isoform X14

    UniProtKB/TrEMBL
    F7FCH6
    Conserved Domains (7) summary
    smart00228
    Location:719 → 807
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00116
    Location:12 → 241
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00992
    Location:987 → 1075
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:289 → 329
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:128 → 186
    LRR_8; Leucine rich repeat
    pfam16182
    Location:1721 → 1811
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  13. XM_056822825.1 → XP_056678803.1  protein scribble homolog isoform X5

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000066873.1, ENSMODT00000129888.1

  14. XM_016432011.2 → XP_016287497.1  protein scribble homolog isoform X17

    UniProtKB/TrEMBL
    F7FCH6

  15. XM_016432007.2 → XP_016287493.1  protein scribble homolog isoform X10

    UniProtKB/TrEMBL
    F7FCH6

  16. XM_016432006.2 → XP_016287492.1  protein scribble homolog isoform X9

    UniProtKB/TrEMBL
    F7FCH6

  17. XM_016432008.2 → XP_016287494.1  protein scribble homolog isoform X11

    UniProtKB/TrEMBL
    F7FCH6

  18. XM_016432005.2 → XP_016287491.1  protein scribble homolog isoform X8

    UniProtKB/TrEMBL
    F7FCH6

  19. XM_016432003.2 → XP_016287489.1  protein scribble homolog isoform X6

    UniProtKB/TrEMBL
    F7FCH6

  20. XM_056822852.1 → XP_056678830.1  protein scribble homolog isoform X42

    UniProtKB/TrEMBL
    A0A5F8G2B9

  21. XM_056822841.1 → XP_056678819.1  protein scribble homolog isoform X32

    UniProtKB/TrEMBL
    A0A5F8H9M2

  22. XM_056822853.1 → XP_056678831.1  protein scribble homolog isoform X43

    UniProtKB/TrEMBL
    A0A5F8G2B9, A0A5F8G790
    Related
    ENSMODP00000043271.1, ENSMODT00000079413.2

  23. XM_056822849.1 → XP_056678827.1  protein scribble homolog isoform X40

    UniProtKB/TrEMBL
    A0A5F8G2B9

  24. XM_056822847.1 → XP_056678825.1  protein scribble homolog isoform X38

    UniProtKB/TrEMBL
    A0A5F8G2B9

  25. XM_056822854.1 → XP_056678832.1  protein scribble homolog isoform X44

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000056633.2, ENSMODT00000052523.2

  26. XM_056822848.1 → XP_056678826.1  protein scribble homolog isoform X39

    UniProtKB/TrEMBL
    F7FCH6

  27. XM_056822843.1 → XP_056678821.1  protein scribble homolog isoform X34

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000011349.5, ENSMODT00000011569.5

  28. XM_056822835.1 → XP_056678813.1  protein scribble homolog isoform X27

    UniProtKB/TrEMBL
    F7FCH6

  29. XM_056822851.1 → XP_056678829.1  protein scribble homolog isoform X41

    UniProtKB/TrEMBL
    F7FCH6

  30. XM_056822845.1 → XP_056678823.1  protein scribble homolog isoform X36

    UniProtKB/TrEMBL
    F7FCH6

  31. XM_056822844.1 → XP_056678822.1  protein scribble homolog isoform X35

    UniProtKB/TrEMBL
    F7FCH6

  32. XM_056822846.1 → XP_056678824.1  protein scribble homolog isoform X37

    UniProtKB/TrEMBL
    F7FCH6

  33. XM_056822840.1 → XP_056678818.1  protein scribble homolog isoform X31

    UniProtKB/TrEMBL
    F7FCH6

  34. XM_056822842.1 → XP_056678820.1  protein scribble homolog isoform X33

    UniProtKB/TrEMBL
    F7FCH6

  35. XM_056822836.1 → XP_056678814.1  protein scribble homolog isoform X28

    UniProtKB/TrEMBL
    F7FCH6

  36. XM_056822834.1 → XP_056678812.1  protein scribble homolog isoform X26

    UniProtKB/TrEMBL
    F7FCH6

  37. XM_007488696.3 → XP_007488758.1  protein scribble homolog isoform X24

    UniProtKB/TrEMBL
    F7FCH6
    Conserved Domains (7) summary
    smart00228
    Location:719 → 807
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00116
    Location:12 → 241
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00992
    Location:987 → 1075
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:289 → 329
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:128 → 186
    LRR_8; Leucine rich repeat
    pfam16182
    Location:1648 → 1738
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  38. XM_056822838.1 → XP_056678816.1  protein scribble homolog isoform X30

    UniProtKB/TrEMBL
    F7FCH6

  39. XM_056822832.1 → XP_056678810.1  protein scribble homolog isoform X23

    UniProtKB/TrEMBL
    F7FCH6

  40. XM_007488693.3 → XP_007488755.1  protein scribble homolog isoform X22

    UniProtKB/TrEMBL
    F7FCH6
    Conserved Domains (7) summary
    smart00228
    Location:719 → 807
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00116
    Location:12 → 241
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00992
    Location:987 → 1075
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:289 → 329
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:128 → 186
    LRR_8; Leucine rich repeat
    pfam16182
    Location:1665 → 1755
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  41. XM_007488692.3 → XP_007488754.1  protein scribble homolog isoform X20

    UniProtKB/TrEMBL
    F7FCH6
    Conserved Domains (7) summary
    smart00228
    Location:719 → 807
    PDZ; Domain present in PSD-95, Dlg, and ZO-1/2
    cd00116
    Location:12 → 241
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    cd00992
    Location:987 → 1075
    PDZ_signaling; PDZ domain found in a variety of Eumetazoan signaling molecules, often in tandem arrangements. May be responsible for specific protein-protein interactions, as most PDZ domains bind C-terminal polypeptides, and binding to internal (non-C-terminal) ...
    sd00033
    Location:14 → 37
    LRR_RI; leucine-rich repeat [structural motif]
    pfam12799
    Location:289 → 329
    LRR_4; Leucine Rich repeats (2 copies)
    pfam13855
    Location:128 → 186
    LRR_8; Leucine rich repeat
    pfam16182
    Location:1683 → 1773
    AbLIM_anchor; Putative adherens-junction anchoring region of AbLIM

  42. XM_056822830.1 → XP_056678808.1  protein scribble homolog isoform X19

    UniProtKB/TrEMBL
    F7FCH6

  43. XM_056822829.1 → XP_056678807.1  protein scribble homolog isoform X16

    UniProtKB/TrEMBL
    F7FCH6
    Related
    ENSMODP00000083456.1, ENSMODT00000121041.1

  44. XM_056822828.1 → XP_056678806.1  protein scribble homolog isoform X12

    UniProtKB/TrEMBL
    F7FCH6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.