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DERA deoxyribose-phosphate aldolase [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100012599, updated on 8-May-2024

Summary

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Gene symbol
DERA
Gene description
deoxyribose-phosphate aldolase
See related
EnsemblRapid:ENSMODG00000017903
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See DERA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 5 NC_077231.1 (126706253..126893933)
103 previous assembly MonDom5 (GCF_000002295.2) 8 NC_008808.1 (102841077..102982150, complement)

Chromosome 5 - NC_077231.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103101051 Neighboring gene uncharacterized LOC130454561 Neighboring gene serine/threonine kinase receptor associated protein Neighboring gene uncharacterized LOC107650086 Neighboring gene solute carrier family 15 member 5 Neighboring gene microsomal glutathione S-transferase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables deoxyribose-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in deoxyribonucleotide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
deoxyribose-phosphate aldolase
Names
deoxyribose-phosphate aldolase (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077231.1 Reference mMonDom1.pri

    Range
    126706253..126893933
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_056799299.1 → XP_056655277.1  deoxyribose-phosphate aldolase isoform X1

  2. XM_007503600.3 → XP_007503662.2  deoxyribose-phosphate aldolase isoform X2

    Related
    ENSMODP00000022318.4, ENSMODT00000022708.5
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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