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LIN28A lin-28 homolog A [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100012320, updated on 8-May-2024

Summary

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Gene symbol
LIN28A
Gene description
lin-28 homolog A
See related
EnsemblRapid:ENSMODG00000051625
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Also known as
LIN28
Orthologs
human mouse all
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Genomic context

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See LIN28A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 4 NC_077230.1 (379876611..379903619, complement)
103 previous assembly MonDom5 (GCF_000002295.2) 4 NC_008804.1 (363819914..363846536)

Chromosome 4 - NC_077230.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase A1 Neighboring gene high mobility group nucleosomal binding domain 2 Neighboring gene dehydrodolichyl diphosphate synthase subunit Neighboring gene uncharacterized LOC130453874 Neighboring gene zinc finger protein 683

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein lin-28 homolog A
Names
RNA-binding protein LIN-28

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077230.1 Reference mMonDom1.pri

    Range
    379876611..379903619 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001363432.3 → XP_001363469.1  protein lin-28 homolog A

    UniProtKB/TrEMBL
    F6T943
    Related
    ENSMODP00000071831.1, ENSMODT00000103934.1
    Conserved Domains (1) summary
    cd04458
    Location:39 → 108
    CSP_CDS; Cold-Shock Protein (CSP) contains an S1-like cold-shock domain (CSD) that is found in eukaryotes, prokaryotes, and archaea. CSP's include the major cold-shock proteins CspA and CspB in bacteria and the eukaryotic gene regulatory factor Y-box protein. ...
Nucleotide Protein
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