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ATF4 activating transcription factor 4 [ Monodelphis domestica (gray short-tailed opossum) ]

Gene ID: 100012224, updated on 6-Jun-2024

Summary

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Gene symbol
ATF4
Gene description
activating transcription factor 4
See related
EnsemblRapid:ENSMODG00000009380
Gene type
protein coding
RefSeq status
MODEL
Organism
Monodelphis domestica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
Orthologs
human mouse all
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Genomic context

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See ATF4 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 5 NC_077231.1 (102762616..102763882)
103 previous assembly MonDom5 (GCF_000002295.2) 8 NC_008808.1 (64334454..64336630, complement)

Chromosome 5 - NC_077231.1Genomic Context describing neighboring genes Neighboring gene beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase Neighboring gene uncharacterized LOC130454540 Neighboring gene mitochondrial ribosome and complex I assembly factor AltMIEF1 Neighboring gene mitochondrial elongation factor 1 Neighboring gene ribosomal protein S19 binding protein 1 Neighboring gene uncharacterized LOC107650055

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ATF1-ATF4 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ATF4-CREB1 transcription factor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cyclic AMP-dependent transcription factor ATF-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mMonDom1.pri

Genomic

  1. NC_077231.1 Reference mMonDom1.pri

    Range
    102762616..102763882
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001366430.5 → XP_001366467.2  cyclic AMP-dependent transcription factor ATF-4

    UniProtKB/TrEMBL
    F7CPU4
    Related
    ENSMODP00000079030.1, ENSMODT00000095385.1
Nucleotide Protein
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