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ACOX2 acyl-CoA oxidase 2 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100009549, updated on 8-Mar-2024

Summary

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Gene symbol
ACOX2
Gene description
acyl-CoA oxidase 2
See related
Ensembl:ENSOCUG00000004155
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
THCA
Orthologs
human mouse all
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Genomic context

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See ACOX2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 9 NC_067382.1 (90814864..90841787)

Chromosome 9 - NC_067382.1Genomic Context describing neighboring genes Neighboring gene FAM3 metabolism regulating signaling molecule D Neighboring gene family with sequence similarity 107 member A Neighboring gene uncharacterized LOC127492326 Neighboring gene potassium channel tetramerization domain containing 6 Neighboring gene mitotic spindle assembly checkpoint protein MAD2A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067382.1 Chromosome 9 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular cloning and expression of cDNA encoding 3alpha,7alpha,12alpha-trihydroxy-5beta-chole stanoyl-CoA oxidase from rabbit liver. Pedersen JI, et al. J Biol Chem, 1997 Jul 18. PMID 9218493
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables palmitoyl-CoA oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation using acyl-CoA oxidase IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisomal acyl-coenzyme A oxidase 2
Names
3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase
3-alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase
3alfa, 7alfa 12alfa-trihydroxy-5beta-cholestanoyl-CoA oxidase
THCA-CoA oxidase
THCCox
acyl-CoA oxidase 2, branched chain
acyl-Coenzyme A oxidase 2, branched chain
trihydroxycoprostanoyl-CoA oxidase
NP_001076232.1
XP_008258697.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082763.1 → NP_001076232.1  peroxisomal acyl-coenzyme A oxidase 2

    See identical proteins and their annotated locations for NP_001076232.1

    Status: PROVISIONAL

    Source sequence(s)
    Y13279
    UniProtKB/Swiss-Prot
    O02767
    UniProtKB/TrEMBL
    A0A5F9CML9
    Related
    ENSOCUP00000003596.3, ENSOCUT00000004157.4
    Conserved Domains (2) summary
    PLN02443
    Location:25 → 675
    PLN02443; acyl-coenzyme A oxidase
    cl09933
    Location:20 → 655
    ACAD; Acyl-CoA dehydrogenase

RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067382.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    90814864..90841787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008260475.3 → XP_008258697.1  peroxisomal acyl-coenzyme A oxidase 2 isoform X1

    UniProtKB/TrEMBL
    A0A5F9CML9
    Conserved Domains (2) summary
    PLN02443
    Location:25 → 675
    PLN02443; acyl-coenzyme A oxidase
    cl09933
    Location:20 → 655
    ACAD; Acyl-CoA dehydrogenase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O02767.1 GenPept UniProtKB/Swiss-Prot:O02767

Gene LinkOut

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