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TGFBI transforming growth factor beta induced [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100009230, updated on 8-Mar-2024

Summary

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Gene symbol
TGFBI
Gene description
transforming growth factor beta induced
See related
Ensembl:ENSOCUG00000004928
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See TGFBI in Genome Data Viewer
Location:
chromosome: 3
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (18386938..18496450)

Chromosome 3 - NC_067376.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 25 member 48 Neighboring gene interleukin 9 Neighboring gene leukocyte cell derived chemotaxin 2 Neighboring gene uncharacterized LOC103347879 Neighboring gene SMAD family member 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067376.1 Chromosome 3 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Beta-ig. Molecular cloning and in situ hybridization in corneal tissues. Rawe IM, et al. Invest Ophthalmol Vis Sci, 1997 Apr. PMID 9112985
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transforming growth factor-beta-induced protein ig-h3
Names
Transforming growth factor-beta-induced protein ig-h3
transforming growth factor induced protein
transforming growth factor, beta-induced, 68kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067376.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    18386938..18496450
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017341072.2 → XP_017196561.1  transforming growth factor-beta-induced protein ig-h3 isoform X1

    UniProtKB/TrEMBL
    A0A5F9D1L2

  2. XM_017341073.2 → XP_017196562.1  transforming growth factor-beta-induced protein ig-h3 isoform X2

    UniProtKB/TrEMBL
    A0A5F9D1L2
    Related
    ENSOCUP00000040013.1

  3. XM_002710222.4 → XP_002710268.1  transforming growth factor-beta-induced protein ig-h3 isoform X3

    UniProtKB/TrEMBL
    A0A5F9CRL1, G1TKC9
    Related
    ENSOCUP00000017414.1
    Conserved Domains (2) summary
    COG2335
    Location:504 → 636
    FAS1; Uncaracterized surface protein containing fasciclin (FAS1) repeats [General function prediction only]
    pfam02469
    Location:514 → 634
    Fasciclin; Fasciclin domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95215.2 GenPept UniProtKB/Swiss-Prot:Q95215

Gene LinkOut

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