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S100A11 S100 calcium binding protein A11 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100008975, updated on 8-Mar-2024

Summary

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Gene symbol
S100A11
Gene description
S100 calcium binding protein A11
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Also known as
PCALG
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See S100A11 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (40434030..40449932)

Chromosome 13 - NC_067386.1Genomic Context describing neighboring genes Neighboring gene protein CDV3 homolog Neighboring gene trichohyalin like 1 Neighboring gene uncharacterized LOC108177673 Neighboring gene S100 calcium binding protein A10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067386.1 Chromosome 13 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Calcium-Mediated Control of S100 Proteins: Allosteric Communication via an Agitator/Signal Blocking Mechanism. Xiao Y, et al. J Am Chem Soc, 2017 Aug 23. PMID 28758397
  2. Molecular cloning and sequencing of a cDNA clone encoding a new calcium binding protein, named calgizzarin, from rabbit lung. Watanabe M, et al. Biochem Biophys Res Commun, 1991 Dec 16. PMID 1836726
  3. Formation of monomeric S100B and S100A11 proteins at low ionic strength. Marlatt NM, et al. Biochemistry, 2009 Mar 10. PMID 19216510
  4. Purification, characterization, and partial sequence analysis of a newly identified EF-hand type 13-kDa Ca(2+)-binding protein from smooth muscle and non-muscle tissues. Todoroki H, et al. J Biol Chem, 1991 Oct 5. PMID 1917990
  5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell population proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein S100-A11
Names
calgizzarin
protein S100-C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001082187.1 → NP_001075656.1  protein S100-A11

    See identical proteins and their annotated locations for NP_001075656.1

    Status: PROVISIONAL

    Source sequence(s)
    D10586
    UniProtKB/Swiss-Prot
    P24480
    Conserved Domains (2) summary
    cd05023
    Location:4 → 92
    S-100A11; S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 ...
    pfam13499
    Location:17 → 81
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067386.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    40434030..40449932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P24480.2 GenPept UniProtKB/Swiss-Prot:P24480

Gene LinkOut

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