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TUFT1 tuftelin 1 [ Oryctolagus cuniculus (rabbit) ]

Gene ID: 100008632, updated on 8-Mar-2024

Summary

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Gene symbol
TUFT1
Gene description
tuftelin 1
See related
Ensembl:ENSOCUG00000012659
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryctolagus cuniculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
Orthologs
human mouse all
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Genomic context

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See TUFT1 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (40864993..40918704, complement)

Chromosome 13 - NC_067386.1Genomic Context describing neighboring genes Neighboring gene CUGBP Elav-like family member 3 Neighboring gene sorting nexin 27 Neighboring gene cingulin Neighboring gene U6 spliceosomal RNA Neighboring gene pogo transposable element derived with ZNF domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_067386.1 Chromosome 13 Reference UM_NZW_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Enhancement of alkaline phosphatase synthesis in pulp cells co-cultured with epithelial cells derived from lower rabbit incisors. Shiba H, et al. Cell Biol Int, 2003. PMID 14499661
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in I band IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tuftelin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UM_NZW_1.0 Primary Assembly

Genomic

  1. NC_067386.1 Reference UM_NZW_1.0 Primary Assembly

    Range
    40864993..40918704 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_008264449.3 → XP_008262671.1  tuftelin isoform X2

    UniProtKB/TrEMBL
    A0A5F9C362, A0A5F9C410
    Related
    ENSOCUP00000027494.1
    Conserved Domains (1) summary
    pfam06364
    Location:113 → 214
    DUF1068; Protein of unknown function (DUF1068)

  2. XM_002715358.4 → XP_002715404.1  tuftelin isoform X1

    See identical proteins and their annotated locations for XP_002715404.1

    UniProtKB/TrEMBL
    B7NZE0, Q8HYU6
    Related
    ENSOCUP00000010896.2
    Conserved Domains (1) summary
    pfam06364
    Location:138 → 239
    DUF1068; Protein of unknown function (DUF1068)
Nucleotide Protein
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Gene LinkOut

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