ccka cholecystokinin a [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: cckaprovided by ZNC
Official Full Name: cholecystokinin aprovided by ZNC
Primary source: ZFIN:ZDB-GENE-100922-79
See related: Ensembl:ENSDARG00000070810 AllianceGenome:ZFIN:ZDB-GENE-100922-79
Gene type: protein coding
RefSeq status: INFERRED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: cck; si:ch73-138e9.1
Summary: Predicted to enable neuropeptide hormone activity. Predicted to be involved in digestion. Predicted to be located in extracellular region. Predicted to be active in axon and extracellular space. Is expressed in digestive system; intestine; and preoptic area. Orthologous to human CCK (cholecystokinin). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Genomic context

Location:: chromosome: 16

Exon count:: 3

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	16	NC_007127.7 (5774989..5779208)
105	previous assembly	GRCz10 (GCF_000002035.5)	16	NC_007127.6 (5875369..5879582)

Chromosome 16 - NC_007127.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables hormone activity	IEA Inferred from Electronic Annotation more info
enables neuropeptide hormone activity	IBA Inferred from Biological aspect of Ancestor more info
enables neuropeptide hormone activity	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in digestion	IBA Inferred from Biological aspect of Ancestor more info
acts_upstream_of_or_within digestion	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
is_active_in axon	IBA Inferred from Biological aspect of Ancestor more info
located_in extracellular region	IEA Inferred from Electronic Annotation more info
is_active_in extracellular space	IBA Inferred from Biological aspect of Ancestor more info

General protein information

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Preferred Names: cholecystokinin a

Names: CCK8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001386383.1 → NP_001373312.1 cholecystokinin a precursor

Status: INFERRED

Source sequence(s)

CU467945

UniProtKB/TrEMBL

A0A8M1PZY2, E9QEB3

Related

ENSDARP00000114718.1, ENSDART00000134202.2

Conserved Domains (1) summary

pfam00918
Location:4 → 123

Gastrin; Gastrin/cholecystokinin family