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dnal4b dynein, axonemal, light chain 4b [ Danio rerio (zebrafish) ]

Gene ID: 100005529, updated on 2-Nov-2024

Summary

Official Symbol
dnal4bprovided by ZNC
Official Full Name
dynein, axonemal, light chain 4bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-050208-510
See related
Ensembl:ENSDARG00000088841 AllianceGenome:ZFIN:ZDB-GENE-050208-510
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
dnal4; zgc:109994; si:dkey-4c23.7
Summary
Predicted to act upstream of or within microtubule-based process. Predicted to be located in cytoplasm and microtubule. Predicted to be part of dynein complex. Human ortholog(s) of this gene implicated in congenital mirror movement disorder. Orthologous to human DNAL4 (dynein axonemal light chain 4). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See dnal4b in Genome Data Viewer
Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (24975055..24984733, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (24947431..24957109, complement)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene sialoadhesin Neighboring gene family with sequence similarity 20 member C, like Neighboring gene si:dkey-179j5.5 Neighboring gene uncharacterized LOC137488938

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC109994, MGC173644

Gene Ontology Provided by ZFIN

Process Evidence Code Pubs
acts_upstream_of_or_within microtubule-based process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
part_of dynein complex IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
dynein, axonemal, light chain 4b
Names
dynein, axonemal, light chain 4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020502.1NP_001018338.1  dynein, axonemal, light chain 4b

    See identical proteins and their annotated locations for NP_001018338.1

    Status: PROVISIONAL

    Source sequence(s)
    BC095114
    UniProtKB/TrEMBL
    A0A8M1N5V8, Q503Z7
    Related
    ENSDARP00000121922.2, ENSDART00000142147.3
    Conserved Domains (1) summary
    pfam01221
    Location:21104
    Dynein_light; Dynein light chain type 1

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    24975055..24984733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395108.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    328401..338079 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395353.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    138980..148739 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)