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si:dkey-85k7.10 si:dkey-85k7.10 [ Danio rerio (zebrafish) ]

Gene ID: 100004057, updated on 2-Nov-2024

Summary

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Official Symbol
si:dkey-85k7.10provided by ZNC
Official Full Name
si:dkey-85k7.10provided by ZNC
Primary source
ZFIN:ZDB-GENE-160728-49
See related
Ensembl:ENSDARG00000073844 AllianceGenome:ZFIN:ZDB-GENE-160728-49
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable endonuclease activity; metal ion binding activity; and nucleic acid binding activity. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See si:dkey-85k7.10 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 7 NC_007118.7 (21920668..21924414, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 7 NC_007118.6 (21654295..21658075, complement)

Chromosome 7 - NC_007118.7Genomic Context describing neighboring genes Neighboring gene si:dkey-85k7.12 Neighboring gene POP7 homolog, ribonuclease P/MRP subunit Neighboring gene erythropoietin a Neighboring gene UFM1-specific peptidase 1 Neighboring gene neuroligin 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables endonuclease activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables nuclease activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007118.7 Reference GRCz11 Primary Assembly

    Range
    21920668..21924414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068222583.1 → XP_068078684.1  endonuclease domain-containing 1 protein

    Related
    ENSDARP00000100100.3, ENSDART00000113652.4
Nucleotide Protein Strain
Heading Accession and Version

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