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b3galt8 beta-1,3-galactosyltransferase 8 [ Danio rerio (zebrafish) ]

Gene ID: 100003996, updated on 2-Nov-2024

Summary

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Official Symbol
b3galt8provided by ZNC
Official Full Name
beta-1,3-galactosyltransferase 8provided by ZNC
Primary source
ZFIN:ZDB-GENE-131127-583
See related
Ensembl:ENSDARG00000097795 AllianceGenome:ZFIN:ZDB-GENE-131127-583
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:ch73-195i19.3
Summary
Predicted to enable hexosyltransferase activity. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
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Genomic context

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See b3galt8 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (28555892..28559015, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (27957752..27959026, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene notochord formation related Neighboring gene zgc:162952 Neighboring gene tenascin Cb Neighboring gene uncharacterized LOC137495594 Neighboring gene uncharacterized LOC137495517

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables transferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within protein glycosylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    28555892..28559015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068221440.1 → XP_068077541.1  beta-1,3-galactosyltransferase 2

    Related
    ENSDARP00000132244.1, ENSDART00000154495.3

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394579.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    14587..17710 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_068218227.1 → XP_068074328.1  beta-1,3-galactosyltransferase 2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials