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serpina10b serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10b [ Danio rerio (zebrafish) ]

Gene ID: 100003661, updated on 18-Sep-2024

Summary

Official Symbol
serpina10bprovided by ZNC
Official Full Name
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-100716-5
See related
Ensembl:ENSDARG00000036968 AllianceGenome:ZFIN:ZDB-GENE-100716-5
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
serpina10; si:ch1073-416d2.3
Summary
Predicted to be located in extracellular space. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See serpina10b in Genome Data Viewer
Location:
chromosome: 17
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 17 NC_007128.7 (53291171..53295775)
105 previous assembly GRCz10 (GCF_000002035.5) 17 NC_007128.6 (53203320..53208404)

Chromosome 17 - NC_007128.7Genomic Context describing neighboring genes Neighboring gene gamma-aminobutyric acid receptor subunit rho-1 Neighboring gene ataxin 3 Neighboring gene si:ch1073-416d2.4 Neighboring gene DEAD (Asp-Glu-Ala-Asp) box helicase 24 Neighboring gene ankyrin repeat and SOCS box containing 2b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables peptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
enables serine-type endopeptidase inhibitor activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within blood coagulation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within negative regulation of peptidase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein Z-dependent protease inhibitor
Names
serine (or cysteine) proteinase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007128.7 Reference GRCz11 Primary Assembly

    Range
    53291171..53295775
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009293350.4XP_009291625.1  protein Z-dependent protease inhibitor

    UniProtKB/TrEMBL
    A0A8M3AK66
    Related
    ENSDARP00000141525.2, ENSDART00000170686.2
    Conserved Domains (1) summary
    pfam00079
    Location:35392
    Serpin; Serpin (serine protease inhibitor)