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cacng7b calcium channel, voltage-dependent, gamma subunit 7b [ Danio rerio (zebrafish) ]

Gene ID: 100003278, updated on 18-Sep-2024

Summary

Official Symbol
cacng7bprovided by ZNC
Official Full Name
calcium channel, voltage-dependent, gamma subunit 7bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-100921-51
See related
Ensembl:ENSDARG00000070624 AllianceGenome:ZFIN:ZDB-GENE-100921-51
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-117n22.2
Summary
Predicted to enable channel regulator activity and voltage-gated calcium channel activity. Predicted to be involved in several processes, including neurotransmitter receptor internalization; neurotransmitter receptor transport, postsynaptic endosome to lysosome; and postsynaptic neurotransmitter receptor diffusion trapping. Predicted to act upstream of or within calcium ion transmembrane transport and regulation of ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in postsynaptic density membrane. Orthologous to human CACNG7 (calcium voltage-gated channel auxiliary subunit gamma 7). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See cacng7b in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (12963020..13004121, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (13072900..13114238, complement)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene calcium channel, voltage-dependent, gamma subunit 6b Neighboring gene calcium channel, voltage-dependent, gamma subunit 8b Neighboring gene protein kinase C, gamma Neighboring gene glutamate receptor ionotropic, NMDA 2D

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables calcium channel activity IEA
Inferred from Electronic Annotation
more info
 
enables channel regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables voltage-gated calcium channel activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
part_of monoatomic ion channel complex IEA
Inferred from Electronic Annotation
more info
 
is_active_in postsynaptic density membrane IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
voltage-dependent calcium channel gamma-7 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    12963020..13004121 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001342843.7XP_001342879.2  voltage-dependent calcium channel gamma-7 subunit

    UniProtKB/TrEMBL
    A0A2R8QBC8, A0A8M1Q7R1
    Related
    ENSDARP00000151916.1, ENSDART00000184863.1
    Conserved Domains (1) summary
    cl21598
    Location:18195
    PMP22_Claudin; PMP-22/EMP/MP20/Claudin family