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cacng6b calcium channel, voltage-dependent, gamma subunit 6b [ Danio rerio (zebrafish) ]

Gene ID: 100003220, updated on 27-Mar-2024

Summary

Official Symbol
cacng6bprovided by ZNC
Official Full Name
calcium channel, voltage-dependent, gamma subunit 6bprovided by ZNC
Primary source
ZFIN:ZDB-GENE-100922-272
See related
Ensembl:ENSDARG00000046079 AllianceGenome:ZFIN:ZDB-GENE-100922-272
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
si:dkey-38o19.9
Summary
Predicted to enable calcium channel regulator activity. Predicted to be involved in regulation of calcium ion transmembrane transport via high voltage-gated calcium channel. Predicted to act upstream of or within calcium ion transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of L-type voltage-gated calcium channel complex. Human ortholog(s) of this gene implicated in aspirin-induced respiratory disease. Orthologous to human CACNG6 (calcium voltage-gated channel auxiliary subunit gamma 6). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See cacng6b in Genome Data Viewer
Location:
chromosome: 16
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (12828921..12866587)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (12938778..12976469)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene isochorismatase domain containing 2 Neighboring gene U2 small nuclear RNA auxiliary factor 2a Neighboring gene calcium channel, voltage-dependent, gamma subunit 8b Neighboring gene calcium channel, voltage-dependent, gamma subunit 7b

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
voltage-dependent calcium channel gamma-6 subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    12828921..12866587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001342797.6XP_001342833.1  voltage-dependent calcium channel gamma-6 subunit-like

    UniProtKB/TrEMBL
    A0A8M1Q7Q8, E7F9M5
    Related
    ENSDARP00000067740.5, ENSDART00000067741.6
    Conserved Domains (1) summary
    pfam13903
    Location:55243
    Claudin_2; PMP-22/EMP/MP20/Claudin tight junction