U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

dqx1 DEAQ box RNA-dependent ATPase 1 [ Danio rerio (zebrafish) ]

Gene ID: 100002601, updated on 2-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
dqx1provided by ZNC
Official Full Name
DEAQ box RNA-dependent ATPase 1provided by ZNC
Primary source
ZFIN:ZDB-GENE-150224-1
See related
AllianceGenome:ZFIN:ZDB-GENE-150224-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable ATP binding activity; helicase activity; and hydrolase activity. Orthologous to human DQX1 (DEAQ-box RNA dependent ATPase 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See dqx1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (72068619..72080161, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (71282329..71295754, complement)

Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene proline-rich coiled-coil 2B Neighboring gene ATP-dependent RNA helicase DQX1-like Neighboring gene oxytocin Neighboring gene threonine synthase-like 2 Neighboring gene fatty acid binding protein 1a, liver

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables helicase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
  
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
ATP-dependent RNA helicase DQX1
Names
DEAQ box polypeptide 1 (RNA-dependent ATPase)
XP_021332040.2
XP_068077682.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007116.7 Reference GRCz11 Primary Assembly

    Range
    72068619..72080161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021476365.2 → XP_021332040.2  ATP-dependent RNA helicase DQX1

  2. XM_068221581.1 → XP_068077682.1  ATP-dependent RNA helicase DQX1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials