si:ch1073-376c22.1 si:ch1073-376c22.1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:ch1073-376c22.1provided by ZNC
Official Full Name: si:ch1073-376c22.1provided by ZNC
Primary source: ZFIN:ZDB-GENE-141210-15
See related: Ensembl:ENSDARG00000102704 AllianceGenome:ZFIN:ZDB-GENE-141210-15
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: v-fbpl; zmp:0000000612
Summary: Predicted to enable fucose binding activity. Predicted to be involved in anatomical structure morphogenesis; regulation of cellular defense response; and regulation of complement activation, lectin pathway. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

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Location:: chromosome: 19

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	19	NC_007130.7 (48409907..48416757)
105	previous assembly	GRCz10 (GCF_000002035.5)	19	NC_007130.6 (48750949..48757361)

Chromosome 19 - NC_007130.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables fucose binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
involved_in anatomical structure morphogenesis	IEA Inferred from Electronic Annotation more info
involved_in regulation of cellular defense response	IEA Inferred from Electronic Annotation more info
involved_in regulation of complement activation, lectin pathway	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC100000126

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.