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Links from GEO DataSets

Items: 18

1.

Mouse Immune system

(Submitter supplied) Groups of samples used in Microarray and comparative genomics-based identification of genes and gene regulatory regions of the mouse immune system profiles. Keywords: other
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1406
128 Samples
Download data
Series
Accession:
GSE2168
ID:
200002168
2.

GUELPH Bovine 180 immune-endocrine microarray

(Submitter supplied) The in-house microarray consists of 167 RT-PCR derived DNA fragments representing 167 ORFs from bovine. The DNA fragments are printed 4 times on the surface of the microarray (four-replicate blocks). The 167 immune and endocrine genes grouped into the following categories: cytokine genes, chemoattractants or chemokines and their respective receptor genes, immune regulatory genes, T-cell associated genes, pattern recognition or innate host defense genes, immunglobin (Ig) or Ig-related genes, complement genes, antigen processing or presenting genes, and genes encoding endocrine hormones or their receptors. more...
Organism:
Arabidopsis thaliana; Bos taurus
Download data
Platform
Accession:
GPL4404
ID:
100004404
3.

Mouse Expression DB 2001 CHMC

(Submitter supplied) Expression profiles of different mouse tissue samples profiles. Keywords: other
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL1406
161 Samples
Download data
Series
Accession:
GSE2178
ID:
200002178
4.

whole brains from nicotinic acetylcholine receptor subunit mutant mice and littermate controls

(Submitter supplied) Studies using mice with beta4 nicotinic acetylcholine receptor (nAChR) subunit deficiency (beta4-/- mice) helped reveal the roles of this subunit in bradycardiac response to vagal stimulation, nicotine-induced seizure activity and anxiety. In order to identify genes that might be related to beta4-containing nAChRs activity, we compared the mRNA expression profiles of brains from beta4-/- and wild-type mice using Affymetrix U74Avr2 microarray. more...
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS2309
Platform:
GPL81
11 Samples
Download data
Series
Accession:
GSE5320
ID:
200005320
5.
Full record GDS2309

Beta-4 nicotinic acetylcholine receptor subunit deficiency effect on the brain

Analysis of brains of beta-4 nicotinic acetylcholine receptor (nAChR) subunit null mutants. nAChRs are pentameric ion channels. Results provide insight into the molecular basis of the beta-4 subunit's role in the bradycardic response to vagal stimulation, nicotine-induced seizure, and anxiety.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 2 genotype/variation sets
Platform:
GPL81
Series:
GSE5320
11 Samples
Download data
DataSet
Accession:
GDS2309
ID:
2309
6.

Transcriptomic analyis of the response of porcine PBMC to stimulation with concanavalin A

(Submitter supplied) One of the top priorities of the swine industry worldwide is to decrease the susceptibility of its animals to infectious diseases. There is therefore now an increased focus on the production of more “robust” animals, which have lower susceptibility to a broad range of infectious diseases. One general measure of immune competence is the proliferative response of peripheral blood mononuclear cells (PBMC) to mitogenic stimulation. more...
Organism:
Sus scrofa
Type:
Expression profiling by array
Platform:
GPL14897
24 Samples
Download data: GPR
Series
Accession:
GSE33760
ID:
200033760
7.

Expression data from brain tissue of Rattus norvegicus treated with D-Serine

(Submitter supplied) d-serine is naturally present throughout the human body. It is also used as add-on therapy for treatment-refractory schizophrenia. d-Serine interacts with the strychnine-insensitive glycine binding site of NMDA receptor, and this interaction could lead to potentially toxic activity (i.e., excitotoxicity) in brain tissue. The transcriptomic changes that occur in the brain after d-serine exposure have not been fully explored. more...
Organism:
Rattus norvegicus
Type:
Expression profiling by array
Dataset:
GDS3643
Platform:
GPL1355
24 Samples
Download data: CEL
Series
Accession:
GSE10748
ID:
200010748
8.
Full record GDS3643

D-serine effect on the brain: dose response

Analysis of forebrains of animals treated with up to 500 mg/kg D-serine for 96 hours. D-serine is involved in many physiological processes through its interaction with the glycine binding site of the NMDA receptor. Results provide insight into the impact of D-serine exposure on neuronal functions.
Organism:
Rattus norvegicus
Type:
Expression profiling by array, count, 2 agent, 6 dose sets
Platform:
GPL1355
Series:
GSE10748
24 Samples
Download data: CEL
DataSet
Accession:
GDS3643
ID:
3643
9.

Hemin timecourse 0-72h

(Submitter supplied) K562 cells (duplicate cultures A & B) are treated with 50 micromolar hemin for 0, 6, 12, 24, 48, 72 hours followed by RNA extraction and gene expression profiling on Affymetrix human U133A arrays and analysis by MAS 5.0 Keywords: other
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS826
Platform:
GPL96
12 Samples
Download data
Series
Accession:
GSE1036
ID:
200001036
10.
Full record GDS826

Erythroid differentiation of erythroleukemia cell line induced by hemin: time course

Expression profiling of K562 erythroleukemia cells induced to differentiate into erythroid-like cells by hemin. K562 cells examined at various time points up to 72 hours following treatment with 50 uM hemin. Results provide insight into mechanisms underlying hemoglobinization.
Organism:
Homo sapiens
Type:
Expression profiling by array, count, 2 agent, 6 time sets
Platform:
GPL96
Series:
GSE1036
12 Samples
Download data
DataSet
Accession:
GDS826
ID:
826
11.

Normal_human_tissues_genomic_controls

(Submitter supplied) Array hybridizations profiling diverse human tissues; for each array the human tissue RNA is hybridized against a universal reference RNA. Experiments 1-3 are replicates of universal reference RNA vs. genomic DNA hybridizations, used to estimate transcript abundance. Arrays 4-8 are tissue RNA vs. genomic DNA hybridizations, carried out to evaluate the method for estimating transcript abundance (see manuscript for details). more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL1827
8 Samples
Download data
Series
Accession:
GSE2194
ID:
200002194
12.

Normal_human_tissues

(Submitter supplied) Array hybridizations profiling diverse human tissues; for each array the human tissue RNA is hybridized against a universal reference RNA. Series_type: Logical set Set of arrays organized by shared biological context, such as organism, tumors types, processes, etc. Keywords: other
Organism:
Homo sapiens
Type:
Expression profiling by array
Datasets:
GDS1085 GDS1088
5 related Platforms
123 Samples
Download data
Series
Accession:
GSE2193
ID:
200002193
13.
Full record GDS1088

Normal tissues of diverse types (SHDP)

Expression profiling of 115 samples from 35 different types of normal tissues. Samples obtained by surgery or autopsy, and evaluated by pathologists. Results provide insight into the molecular organization of diverse cell types, and provide a baseline for comparison to diseased tissues.
Organism:
Homo sapiens
Type:
Expression profiling by array, log ratio, 4 tissue sets
Platform:
GPL1826
Series:
GSE2193
11 Samples
Download data
14.
Full record GDS1085

Normal tissues of diverse types (SHBW)

Expression profiling of 115 samples from 35 different types of normal tissues. Samples obtained by surgery or autopsy, and evaluated by pathologists. Results provide insight into the molecular organization of diverse cell types, and provide a baseline for comparison to diseased tissues.
Organism:
Homo sapiens
Type:
Expression profiling by array, log ratio, 20 tissue sets
Platform:
GPL1823
Series:
GSE2193
35 Samples
Download data
15.

Murine bone marrow B cell precursors

(Submitter supplied) Affymetrix GeneChip derived gene expression profiles of flow sorted murine B cell precursors, ex-vivo isolated, RNA-amplified Keywords = RNA amplification, B cell development, oligonucleotide arrays Keywords: ordered
Organism:
Mus musculus
Type:
Expression profiling by array
Dataset:
GDS52
Platforms:
GPL75 GPL76
55 Samples
Download data
Series
Accession:
GSE13
ID:
200000013
16.
Full record GDS52

Bone marrow B cell precursors (Mu11K-B)

Gene expression profiles of five consecutive stages of B cell development. Flow-cytometrically purified or ex vivo-isolated cells examined.
Organism:
Mus musculus
Type:
Expression profiling by array, count, 5 cell type sets
Platform:
GPL76
Series:
GSE13
27 Samples
Download data
17.

Transcriptional analysis of PBMCs reveals sex specific changes in the aging of the immune system

(Submitter supplied) Aging and sex have a strong influence on the functional capacity of the immune system. In general, the immune response in females is stronger than that in males, but there is little information about the effect of aging on this difference. To address this question, we performed a transcriptomic analysis of peripheral blood mononuclear cells derived from nonagenarians and young controls. We found 337 and 269 genes to be differentially expressed (p<0.05, fold change >1.5 or <-1.5) in nonagenarian females and males, respectively; 177 of these were changed in both sexes. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL15988
176 Samples
Download data: TXT
Series
Accession:
GSE65219
ID:
200065219
18.

Gene expression in nonagenarian (Vitality 90+)

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL15988
327 Samples
Download data
Series
Accession:
GSE40366
ID:
200040366
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