U.S. flag

An official website of the United States government

Format
Items per page
Sort by

Send to:

Choose Destination

Search results

Items: 1 to 20 of 792

1.

EcoToxChip 2016 LSARP RNASeq database

(Submitter supplied) As part of the EcoToxChip project, 49 distinct exposure studies were conducted on three lab model species (Japanese quail, fathead minnow, African clawed frog) and three ecologically relevant species (double crested cormorant, rainbow trout, northern leopard frog), at multiple life stages (embryo, adult), exposed to eight chemicals of environmental concern (ethinyl estradiol-EE2, hexabromocyclododecane-HBCD, lead-Pb, selenomethionine-SeMe, 17β trenbolone-TB, chlorpyrifos-CPF, fluoxetine-FLX, and benzo [a] pyrene-BaP. more...
Organism:
Oncorhynchus mykiss; Xenopus laevis; Coturnix japonica; Lithobates pipiens; Phalacrocorax auritus; Pimephales promelas
Type:
Expression profiling by high throughput sequencing
9 related Platforms
724 Samples
Download data: TXT
Series
Accession:
GSE239776
ID:
200239776
2.

FSHβ links photoperiodic signalling in the mediobasal hypothalamus and pituitary gland to seasonal reproduction in Japanese quail.

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL34121
108 Samples
Download data
Series
Accession:
GSE241775
ID:
200241775
3.

FSHβ links photoperiodic signalling in the pituitary gland to seasonal reproduction in Japanese quail.

(Submitter supplied) Annual cycles in daylength provide an initial predictive environmental cue that plants and animals use to time seasonal biology. Seasonal changes in photoperiodic information acts to entrain endogenous programs in physiology to optimize an animal’s fitness. Attempts to identify the neural and molecular substrates of photoperiodic time measurement in birds have, to date, focussed on blunt changes in light exposure during a restricted period of photoinducibility. more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL34121
54 Samples
Download data: CSV
Series
Accession:
GSE241774
ID:
200241774
4.

FSHβ links photoperiodic signalling in the mediobasal hypothalamus to seasonal reproduction in Japanese quail.

(Submitter supplied) Annual cycles in daylength provide an initial predictive environmental cue that plants and animals use to time seasonal biology. Seasonal changes in photoperiodic information acts to entrain endogenous programs in physiology to optimize an animal’s fitness. Attempts to identify the neural and molecular substrates of photoperiodic time measurement in birds have, to date, focussed on blunt changes in light exposure during a restricted period of photoinducibility. more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL34121
54 Samples
Download data: CSV
Series
Accession:
GSE241772
ID:
200241772
5.

Dosage compensation of Z sex chromosome genes in avian fibroblast cells

(Submitter supplied) Sex in birds is genetically determined, molecular mechanism of which is not well-understood. Their Z sex chromosome (chrZ) lacks whole chromosome inactivation as known for mammalian chrX. To investigate the extent of chrZ dosage compensation and its role in somatic cell’s sex specification, we used a highly-quantitative method and analyzed transcriptional activities of male and female fibroblasts from seven birds. more...
Organism:
Anas platyrhynchos; Meleagris gallopavo; Coturnix japonica; Dromaius novaehollandiae; Pavo cristatus; Taeniopygia guttata; Gallus gallus
Type:
Expression profiling by high throughput sequencing
7 related Platforms
54 Samples
Download data: XLSX
Series
Accession:
GSE213253
ID:
200213253
6.

Sex differences and effect of testosterone on the transcriptome in brain regions underlying quail sexual behavior

(Submitter supplied) To understand the sex differences in brain function that underlie sex differences in behavior we measured the transcriptome of POM, VMN and TnA of adult quail of both sexes either left gonadally intact or gonadectomized and treated with testosterone. Gonadectomy and testosterone-treated groups allowed us to distinguish a suite of genes whose expression is sensitive to testosterone and a suite of genes that are not, the magnitude and pattern of which differs by sex and nucleus.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25495
36 Samples
Download data: FA, TXT
Series
Accession:
GSE167203
ID:
200167203
7.

Gene expression and identification of japanese quail embryonic forebrain cells.

(Submitter supplied) We used single cell RNAseq to identify the populations and identity of cells present in the japanese quail forebrain during its embryonic stages.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL33247
1 Sample
Download data: CSV, MTX, TSV
Series
Accession:
GSE227334
ID:
200227334
8.

Blood transcripts from female Japanese quail given LPS injection or saline

(Submitter supplied) The aim of this experiment was to test how female Japanese quail respond to being housed with sick (LPS treated) relative to control males. LPS injected females were also tested.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29461
29 Samples
Download data: TXT
Series
Accession:
GSE174094
ID:
200174094
9.

Hepatic Transcriptomic Responses to Ethinylestradiol in Two Life Stages of Japanese Quail

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL29437 GPL29461
31 Samples
Download data
Series
Accession:
GSE200396
ID:
200200396
10.

Hepatic Transcriptomic Responses to Ethinylestradiol in Two Life Stages of Japanese Quail [embryonic day 9 RNA-seq]

(Submitter supplied) Chemical risk assessment for avian species typically depends on information from toxicity tests performed in adult birds. Early-life stage (ELS) toxicity tests have been proposed as an attractive alternative, but incorporation of these data into existing frameworks will require knowledge about the similarities/differences between ELS and adult responses. The present study uses transcriptomics to assess hepatic gene expression in ELS and adult Japanese quail following exposure to ethinylestradiol (EE2). more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29437
15 Samples
Download data: TXT
Series
Accession:
GSE200395
ID:
200200395
11.

Hepatic Transcriptomic Responses to Ethinylestradiol in Two Life Stages of Japanese Quail [12-week old RNA-seq]

(Submitter supplied) Chemical risk assessment for avian species typically depends on information from toxicity tests performed in adult birds. Early-life stage (ELS) toxicity tests have been proposed as an attractive alternative, but incorporation of these data into existing frameworks will require knowledge about the similarities/differences between ELS and adult responses. The present study uses transcriptomics to assess hepatic gene expression in ELS and adult Japanese quail following exposure to ethinylestradiol (EE2). more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29461
16 Samples
Download data: TXT
Series
Accession:
GSE200394
ID:
200200394
12.

Neurotranscriptomic changes associated with chick-directed parental care in adult non-reproductive Japanese quail

(Submitter supplied) For many species, parental care critically affects offspring survival. But what drives animals to display parental behaviours towards young? In mammals, pregnancy‐induced physiological transformations seem key in preparing the neural circuits that lead towards attraction (and reduced‐aggression) to young. Beyond mammalian maternal behaviour, knowledge of the neural mechanisms that underlie young‐directed parental care is severely lacking. more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29461
144 Samples
Download data: TXT
Series
Accession:
GSE162378
ID:
200162378
13.

Using transcriptomics and metabolomics to understand species differences in sensitivity to chlorpyrifos in Japanese quail and double-crested cormorant embryos

(Submitter supplied) Modern 21st century toxicity testing makes use of omics technologies to address critical questions in toxicology and chemical management. Of interest are questions relating to chemical mechanisms of toxicity, differences in species sensitivity, and translation of molecular effects to observable apical endpoints. Our study addressed these questions by comparing apical outcomes and multiple omics responses in early-life stage exposure studies with Japanese quail (JQ; Coturnix japonica) and double crested cormorant (DCCO; Phalacrocorax auritus), representing a model and ecological species, respectively. more...
Organism:
Coturnix japonica; Phalacrocorax auritus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL30378 GPL29437
29 Samples
Download data: TXT
Series
Accession:
GSE179770
ID:
200179770
14.

Study of the hypothalamic transcriptome of thermally manipulated during embryogenesis and control Japanese quails submitted or not to a heat challenge at 35 days of age

(Submitter supplied) The goal of the sequencing project was to identify differentially expressed genes between four treatments (12 hypothalamus samples from quail per treatment, 6 from each sex).
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL29437
48 Samples
Download data: TXT
Series
Accession:
GSE161976
ID:
200161976
15.

Japanese quail embryonic skin samples

(Submitter supplied) To understand molecular mechanism of stripe patterning in the embryonic skin of Japanese quail, we compared gene expression profile between black stripe and yelllow stripe by using RNA seq method. Most of differential expression genes were known pigmentation-related genes, but some are unknown role in pigment pattern formation.
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25495
4 Samples
Download data: XLSX
Series
Accession:
GSE119008
ID:
200119008
16.

RNA-Seq Analysis of Spleen from Chicken and Japanese Quail infected with Lentogenic and Velogenic Newcastle Disease Virus

(Submitter supplied) Newcastle disease (ND) affects a few hundred avian species including chicken, and the clinical outcome of Newcastle disease virus (NDV) infection ranges from mild to severe fatal disease depending on the NDV pathotype and the host species involved. Japanese quails serve as natural reservoirs of NDV and play important role in NDV epidemiology. While infection of chicken with velogenic NDV results in severe often fatal illness, the same infection in Japanese quails is results in in apparent infection. more...
Organism:
Coturnix japonica; Gallus gallus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL19652 GPL16133
6 Samples
Download data: TXT
Series
Accession:
GSE98296
ID:
200098296
17.

Comprehensive identification of sexual dimorphism-associated differentially expressed genes in two-factorial designed RNA-seq data on Japanese Quail (Coturnix coturnix japonica)

(Submitter supplied) Japanese quail (Coturnix coturnix japonica) reach sexual maturity early, breed rapidly and successfully, and cost less and require less space than other birds raised for their meat and eggs. Given the value of this species for commercial production and experimental use as well as recent increasing demand, more studies are necessary to determine chromosomal regions and genes associated with gender and breed-differentiation in the species. more...
Organism:
Coturnix japonica
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19652
12 Samples
Download data: CSV
Series
Accession:
GSE64961
ID:
200064961
18.

Avian 12th motor neuron

(Submitter supplied) To determine what kind of genes are involved in vocal learning ability, we performed microarray experiments using 3 vocal learning species (zebra finch, budgerigar, Anna's hummingbird) and 2 non-vocal learning species(ring dive, and Japanese quail) from the bird group. All of the animals are male adults. They were isolated over night and had 1hour light exposure at morning. Birds who did not sing were used in this experiment.
Organism:
Calypte anna; Taeniopygia guttata; Coturnix japonica; Streptopelia risoria; Melopsittacus undulatus
Type:
Expression profiling by array
Platform:
GPL9856
28 Samples
Download data: TXT
Series
Accession:
GSE33667
ID:
200033667
19.

A cross-species analysis of microRNAs in the developing avian face

(Submitter supplied) Avian beaks show extreme species-specific variability in morphology, though they develop from the same primordial structures. In both humans and birds, cranial neural crest cells are the primary source of mesenchyme for the frontonasal prominence; previous work has shown that these cells contain molecular information that regulate species-specific facial variation. To determine the molecular basis of avian craniofacial patterning, we have used Next-Generation sequencing to profile all 20-40nt microRNAs from micro-dissected cranial neural crest cells from the frontonasal prominence of three bird species (chickens, quails, and ducks). more...
Organism:
Gallus gallus; Anas platyrhynchos; Coturnix japonica
Type:
Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL13797 GPL13931 GPL13932
11 Samples
Download data: TXT
Series
Accession:
GSE30716
ID:
200030716
20.

Avian arcopallium

(Submitter supplied) To determine what kind of genes are involved in vocal learning ability, we performed microarray experiments using 3 vocal learning species (zebra finch, budgerigar, Anna's hummingbird) and 2 non-vocal learning species(ring dive, and Japanese quail) from bird group. All of the animals are adult males. They were isolated over night and had 1hour light exposure at morning. Birds who did not sing were used in this experiment.
Organism:
Calypte anna; Taeniopygia guttata; Coturnix japonica; Melopsittacus undulatus; Streptopelia risoria
Type:
Expression profiling by array
Platform:
GPL9856
28 Samples
Download data: TXT
Series
Accession:
GSE28395
ID:
200028395
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

db=gds|term=txid93934[Organism:noexp]|query=1|qty=20|blobid=MCID_666e38d56e9d376f23548e5c|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
   Taxonomic Groups  [List]
Tree placeholder
    Top Organisms  [Tree]

Find related data

Search details

See more...

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center