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Items: 1 to 20 of 26

1.

Ancient vertebrate dermal armor evolved from trunk neural crest

(Submitter supplied) Bone is an evolutionary novelty of vertebrates, likely to have first emerged as part of ancestral dermal armor that consisted of osteogenic and odontogenic components. Whether these early vertebrate structures arose from mesoderm or neural crest cells has been a matter of considerable debate. To examine the developmental origin of the bony part of the dermal armor, we have performed in vivo lineage tracing in the sterlet sturgeon, a representative of non-teleost ray-finned fish that has retained an extensive postcranial dermal skeleton. more...
Organism:
Acipenser ruthenus; Danio rerio; Polypterus senegalus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL18413 GPL33508 GPL33507
14 Samples
Download data: TXT
Series
Accession:
GSE235280
ID:
200235280
2.

Diverse CGG binding proteins across eukaryotes produced by independent domestications of hAT transposons

(Submitter supplied) The human transcription factor (TF) CGGBP1 (“CGG Binding Protein”) is conserved only in amniotes, and is believed to derive from the zf-BED and Hermes transposase DNA-binding domains (DBDs) of a hAT DNA transposon. Here, we examine the DNA binding preferences of a wide variety of metazoan CGGBP1-like TFs with this bipartite domain using PBM experiments. The derived motifs are available at ...
Organism:
Petromyzon marinus; Acipenser ruthenus; Gallus gallus; Erpetoichthys calabaricus; Rhizophagus irregularis; Paramormyrops kingsleyae; Acyrthosiphon pisum; Salmo salar; Fundulus heteroclitus; Sparus aurata; Chrysemys picta; Austrofundulus limnaeus; Anabas testudineus; Amphiprion percula; Salarias fasciatus; Aedes aegypti; Culex quinquefasciatus; Latimeria chalumnae; Cyprinus carpio; synthetic construct; Hucho hucho; Amphiprion ocellaris; Labeo rohita; Mola mola; Sphaeramia orbicularis; Anabarilius grahami; Locusta migratoria; Crocodylus porosus; Homo sapiens; Rhodnius prolixus; Rhipicephalus appendiculatus; Kryptolebias marmoratus; Nematostella vectensis; Acanthochromis polyacanthus; Hippocampus comes; Hofstenia miamia
Type:
Other
Platform:
GPL11260
258 Samples
Download data: TXT
Series
Accession:
GSE157085
ID:
200157085
3.

Small RNA and mRNA expression profiling during Polypterus senegalus (bichir) pectoral fin regeneration

(Submitter supplied) Previous studies of vertebrate appendage regeneration have shown that multiple genetic programs are moduled through regulatory factors. MicroRNAs are short highly conserved non-coding genes that suppress expression of target genes and thereby control multiple genetic programs. Given their important regulatory roles and evolutionary conservation, we hypothesize that microRNAs define a conserved genetic regulatory circuit important for appendage regeneration. more...
Organism:
Polypterus senegalus
Type:
Non-coding RNA profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL21070
8 Samples
Download data: FA, TXT
Series
Accession:
GSE74374
ID:
200074374
4.

Illumina HiSeq 2500 (Polypterus senegalus)

Organism:
Polypterus senegalus
1 Series
6 Samples
Download data
Platform
Accession:
GPL33507
ID:
100033507
5.

Illumina Genome Analyzer IIx (Polypterus senegalus)

Organism:
Polypterus senegalus
1 Series
8 Samples
Download data
Platform
Accession:
GPL21070
ID:
100021070
6.

Bichir scale 88mm, replicate two

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498264
ID:
307498264
7.

Bichir scale 88mm, replicate one

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498263
ID:
307498263
8.

Bichir scale 65mm, replicate two

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498262
ID:
307498262
9.

Bichir scale 65mm, replicate one

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498261
ID:
307498261
10.

Bichir scale 60mm, replicate two

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498260
ID:
307498260
11.

Bichir scale 60mm, replicate one

Organism:
Polypterus senegalus
Source name:
cells of ganoid scale
Platform:
GPL33507
Series:
GSE235280
Download data
Sample
Accession:
GSM7498259
ID:
307498259
12.

pTH15780.2_HK_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000006636_cggbp1_PTHR32344_SF1:0-159,HK design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752481
ID:
304752481
13.

pTH15780.1_ME_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000006636_cggbp1_PTHR32344_SF1:0-159,ME design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752480
ID:
304752480
14.

pTH15779.2_HK_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000013012_cggbp1_PTHR32344_SF1:0-180,HK design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752479
ID:
304752479
15.

pTH15779.1_ME_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000013012_cggbp1_PTHR32344_SF1:0-180,ME design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752478
ID:
304752478
16.

pTH15756.3_ME_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000032769_cggbp1_PTHR32344_SF1:206-528,ME design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752419
ID:
304752419
17.

pTH15756.2_HK_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000032769_cggbp1_PTHR32344_SF1:206-528,HK design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752418
ID:
304752418
18.

pTH15756.1_ME_8mer

Organism:
Erpetoichthys calabaricus
Source name:
ErpCal_ENSECRP00000032769_cggbp1_PTHR32344_SF1:206-528,ME design
Platform:
GPL11260
Series:
GSE157085
Download data: TXT
Sample
Accession:
GSM4752417
ID:
304752417
19.

14dpa mRNA

Organism:
Polypterus senegalus
Source name:
pectoral fin
Platform:
GPL21070
Series:
GSE74374
Download data
Sample
Accession:
GSM1919074
ID:
301919074
20.

7dpa mRNA

Organism:
Polypterus senegalus
Source name:
pectoral fin
Platform:
GPL21070
Series:
GSE74374
Download data
Sample
Accession:
GSM1919073
ID:
301919073
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db=gds|term=txid8288[Organism:exp]|query=1|qty=39|blobid=MCID_66930d0349fc8a23251314b9|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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