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Items: 17

1.

Transcriptome analysis of ARF and Aux/IAA expression during the induction of somatic embryogenesis in Coffea canephora

(Submitter supplied) Somatic embryogenesis (SE) is a useful biotechnological tool to study the morpho-physiological, biochemical and molecular processes during the development of Coffea canephora. Plant growth regulators (PGR) play a key role during cell differentiation in SE. The Auxin-response-factor (ARF) and Auxin/Indole-3-acetic acid (Aux/IAA) are fundamental components involved in the signaling of the IAA. The IAA signaling pathway activates or represses the expression of genes responsive to auxins during the embryogenic transition of the somatic cells. more...
Organism:
Coffea canephora
Type:
Expression profiling by high throughput sequencing
Platform:
GPL26348
12 Samples
Download data: TXT
Series
Accession:
GSE128888
ID:
200128888
2.

Coffea canephora sRNA profiling

(Submitter supplied) SRNAs from field collected Coffea canephora leaves were profiled by Illumina sequencing and 63 unique microRNA genes belonging to 34 families were found.
Organism:
Coffea canephora
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL17111
1 Sample
Download data: TXT
Series
Accession:
GSE46617
ID:
200046617
3.

Illumina NextSeq 500 (Coffea canephora)

Organism:
Coffea canephora
1 Series
12 Samples
Download data
Platform
Accession:
GPL26348
ID:
100026348
4.

Illumina HiSeq 2000 (Coffea canephora)

Organism:
Coffea canephora
1 Series
1 Sample
Download data
Platform
Accession:
GPL17111
ID:
100017111
5.

21_2_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688011
ID:
303688011
6.

21_1_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688010
ID:
303688010
7.

2_2_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688009
ID:
303688009
8.

2_1_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688008
ID:
303688008
9.

1_2_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688007
ID:
303688007
10.

1_1_DAI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688006
ID:
303688006
11.

0_2_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688005
ID:
303688005
12.

0_1_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688004
ID:
303688004
13.

9_2_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688003
ID:
303688003
14.

9_1_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688002
ID:
303688002
15.

14_2_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688001
ID:
303688001
16.

14_1_DBI

Organism:
Coffea canephora
Source name:
Foliar tissue
Platform:
GPL26348
Series:
GSE128888
Download data: TXT
Sample
Accession:
GSM3688000
ID:
303688000
17.

sRNAs_Illumina

Organism:
Coffea canephora
Source name:
Leaves
Platform:
GPL17111
Series:
GSE46617
Download data: TXT
Sample
Accession:
GSM1133287
ID:
301133287
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Supplemental Content

db=gds|term=txid49390[Organism:exp]|query=1|qty=2|blobid=MCID_65d70dd2bf197b1b5eb908ec|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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