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Items: 4

1.

Next Generation Sequencing of tomato germplasm for cold tolerance and yield studies

(Submitter supplied) Purpose: Next-generation sequencing (NGS) has revolutionized systems-based analysis of cellular pathways. The goal of this study is genome wide association mapping for cold tolerance and yield studies in tomato (Solanum spp.) by phenotyping the genotypes under six diffrent temporal arrangments. Also for conducting quantitative reverse transcription polymerase chain reaction (qRT–PCR) assay of cold tolerant genes.
Organism:
Solanum chilense; Solanum lycopersicum var. cerasiforme; Solanum peruvianum; Solanum pimpinellifolium; Solanum lycopersicum; Solanum habrochaites
Type:
Genome variation profiling by high throughput sequencing
6 related Platforms
50 Samples
Download data: VCF
Series
Accession:
GSE200034
ID:
200200034
2.

Illumina HiSeq 2500 (Solanum peruvianum)

Organism:
Solanum peruvianum
1 Series
2 Samples
Download data
Platform
Accession:
GPL32114
ID:
100032114
3.

2805

Organism:
Solanum peruvianum
Source name:
Leaf
Platform:
GPL32114
Series:
GSE200034
Download data
Sample
Accession:
GSM6005092
ID:
306005092
4.

WIR-3957

Organism:
Solanum peruvianum
Source name:
Leaf
Platform:
GPL32114
Series:
GSE200034
Download data
Sample
Accession:
GSM6005073
ID:
306005073
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db=gds|term=txid4082[Organism:exp]|query=1|qty=7|blobid=MCID_661b758d6bc2bd5af4bbe8e0|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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