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Items: 10

1.

Characterization of microRNAs of Beta macrocarpa and their responses to Beet necrotic yellow vein virus infection

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Beta macrocarpa
Type:
Non-coding RNA profiling by array; Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL23874 GPL23780
5 Samples
Download data: XLSX
Series
Accession:
GSE102331
ID:
200102331
2.

Characterization of microRNAs of Beta macrocarpa and their responses to Beet necrotic yellow vein virus infection [miRNA array]

(Submitter supplied) Plant microRNAs (miRNAs) are a class of non-coding RNAs that play important regulatory roles in plant development, defense and abnormal disease symptom formation. Here, 547 known miRNAs, representing 129 miRNA families, and 282 potential novel miRNAs were identified in Beta macrocarpa using small RNA deep sequencing. Through a differential expression analysis, miRNAs responding to Beet necrotic yellow vein virus (BNYVV) infection were identified and confirmed using a microarray analysis. more...
Organism:
Beta macrocarpa
Type:
Non-coding RNA profiling by array
Platform:
GPL23874
3 Samples
Download data: XLSX
Series
Accession:
GSE102330
ID:
200102330
3.

Characterization of microRNAs of Beta macrocarpa and their responses to Beet necrotic yellow vein virus infection [miRNA-seq]

(Submitter supplied) Plant microRNAs (miRNAs) are a class of non-coding RNAs that play important regulatory roles in plant development, defense and abnormal disease symptom formation. Here, 547 known miRNAs, representing 129 miRNA families, and 282 potential novel miRNAs were identified in Beta macrocarpa using small RNA deep sequencing. Through a differential expression analysis, miRNAs responding to Beet necrotic yellow vein virus (BNYVV) infection were identified and confirmed using a microarray analysis. more...
Organism:
Beta macrocarpa
Type:
Non-coding RNA profiling by high throughput sequencing
Platform:
GPL23780
2 Samples
Download data: XLSX
Series
Accession:
GSE101436
ID:
200101436
4.

LC Sciences Beta macrocarpa miRNA array

(Submitter supplied) Probe names that include "PC-" represent novel B. macrocarpa miRNAs. Protocol: See manufacturer's website
Organism:
Beta macrocarpa
2 Series
3 Samples
Download data: XLSX
Platform
Accession:
GPL23874
ID:
100023874
5.

Illumina HiSeq 2000 (Beta macrocarpa)

Organism:
Beta macrocarpa
2 Series
2 Samples
Download data
Platform
Accession:
GPL23780
ID:
100023780
6.

B. macrocarpa-inoculated with BNYVV/water_3

Organism:
Beta macrocarpa
Source name:
small RNA from systemic leaves inoculated with water (channel 1) small RNA from systemic leaves of B. macrocarpa inoculated with BNYVV (channel 2)
Platform:
GPL23874
Series:
GSE102330 GSE102331
Download data: XLSX
Sample
Accession:
GSM2734755
ID:
302734755
7.

B. macrocarpa-inoculated with BNYVV/water_2

Organism:
Beta macrocarpa
Source name:
small RNA from systemic leaves inoculated with water (channel 1) small RNA from systemic leaves of B. macrocarpa inoculated with BNYVV (channel 2)
Platform:
GPL23874
Series:
GSE102330 GSE102331
Download data: XLSX
Sample
Accession:
GSM2734754
ID:
302734754
8.

B. macrocarpa-inoculated with BNYVV/water_1

Organism:
Beta macrocarpa
Source name:
small RNA from systemic leaves inoculated with water (channel 1) small RNA from systemic leaves of B. macrocarpa inoculated with BNYVV (channel 2)
Platform:
GPL23874
Series:
GSE102330 GSE102331
Download data: XLSX
Sample
Accession:
GSM2734753
ID:
302734753
9.

B-Leaf-BN

Organism:
Beta macrocarpa
Source name:
leaf
Platform:
GPL23780
Series:
GSE101436 GSE102331
Download data
Sample
Accession:
GSM2702975
ID:
302702975
10.

B-Leaf-MOCK

Organism:
Beta macrocarpa
Source name:
leaf
Platform:
GPL23780
Series:
GSE101436 GSE102331
Download data
Sample
Accession:
GSM2702974
ID:
302702974
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Supplemental Content

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